Mitochondrial genomes provide an additional data source for nuclear phylogenomics. Recently, the taxonomic classification of Ophiuroidea was changed dramatically based on a molecular phylogenetic analysis that utilized a huge nuclear dataset of transcriptome and target-capture approaches. However, the mitochondrial genome analysis of Ophiuroidea was not conducted sufficiently in depth to allow comparison with current phylogenetic relationships, especially for the Ophintegrida. In this study, eight mitogenomes were newly reported in Amphilepidida and Ophiacanthida. Phylogenetic analyses were undertaken based on the nucleotide sequences of 13 protein coding genes (PCGs), 22 tRNA, and two rRNA, and the amino acid translated sequences of 13 PCGs. The results of the phylogenetic analysis suggested that the amino acid translated sequences were more useful than the nucleotide sequences for the analysis of higher phylogenetic relationships. The mitochondrial gene order of 13 PCGs and two rRNA in Amphilepidida and Ophiacanthida was relatively conserved. However, more complex gene orders occurred in the phylogeny of Amphilepidida and Ophiacanthida, including 22 tRNA. The results of our study suggest that Ophiuroidea has undergone more complex gene rearrangements than other classes of echinoderms.
Ascidiella aspersa, originally native to the northeastern Atlantic, has emerged as a prolific invasive species in coastal waters worldwide. In 2010, it was identified as an alien species in Republic of Korea, rapidly colonizing artificial harbor structures and outcompeting native species. This study employs morphological analyses and genetic sequencing, focusing on mitochondrial DNA (cytochrome oxidase subunit I; mt-COI) and nuclear markers (18S rRNA), to unravel the genetic structure and haplotype diversity (Hd) of A. aspersa populations in Republic of Korea and globally. The analysis of 154 mt-COI and 127 18S rDNA global population sequences, as well as 80 mt-COI and 79 18S-rDNA Korean population sequences, revealed distinct genetic patterns. Among global populations, the mt-COI gene displayed significant genetic diversity, with 21 distinct haplotypes distributed across 41 polymorphic sites, which is indicative of extensive genetic variability. In contrast, the 18S rDNA marker exhibited limited diversity, with only four haplotypes identified at three polymorphic sites. In Korean populations, the mt-COI gene also exhibited substantial genetic diversity, with 14 distinct haplotypes displaying genetic variations at 29 polymorphic sites. Conversely, the 18S rDNA marker in Korean populations revealed a unique genetic pattern, with only one shared haplotype. These findings emphasize the complex genetic diversity within A. aspersa populations, both globally and in Republic of Korea. This genetic analysis provides valuable insights into the species’ colonization history and adaptation mechanisms, shedding light on the factors shaping its genetic structure. Further research is warranted to elucidate the ecological implications of these genetic patterns in the context of invasion biology.
A new species of Cumacea belonging to the genus Dimorphostylis Zimmer was collected from the Dokdo and Ulleung Islands in the East Sea of Korea. The new species, Dimorphostylis pilocorpussp. nov., can be distinguished from all other Dimorphostylis species by the combination of the body surface covered with numerous slender simple setae; carapace with one transverse, a pair of frontal, and three pairs of oblique ridges; three pairs of oblique ridges connected on a submedian carina; telson of the female with 1 pair of short simple and 1 short, stout simple seta centrally; 1 pair of stout simple and 3 pairs of short simple setae on the post-anal section; pleonite 5 of male with 1 spiniform seta on the ventral margin; post-anal section with 2 pairs of stout simple setae bearing a single subterminal setule on both sides; terminal margin with 3 stout simple setae; and a central seta slightly longer than the outer pair of setae. Full illustrations of the new species, including the mouthparts, are given in this paper. A key to the Korean species of Dimorphostylis is also provided.
Invasion by nonindigenous species is a major threat to marine ecosystems. In this study, the distribution and occupied area (as a percentage) of four invasive barnacles (Amphibalanus amphitrite, Amphibalanus eburneus, Amphibalanus improvisus, Perforatus perforatus), and one indigenous (Balanus trigonus) barnacle in 13 ports in three Korean seas (East sea, Korea Strait, and Yellow Sea) were investigated. The average ratio for all five species was 11.17% in summer and 7.59% in winter, indicating a higher occupancy in summer. B. trigonus, which is an indigenous species, was found on all ports, except for one (IC). Of the invasive species, A. amphitrite was found mainly in the Yellow Sea, A. improvisus in the Korea Strait, and A. eburneus along with P. perforatus were found in the East Sea. From nonmetric multidimensional scaling (NMDS) analysis, six parameters related to water temperature and salinity were found to be significantly correlated with the distribution and occupancy status of these five barnacles. Using the six parameters as independent variables, random forest (RF) models were developed. Based on these models, the predicted future dominant invasive species were A. improvisus and A. amphitrite in the Yellow Sea and P. perforatus in the East Sea and Korea Strait. This study suggests that long-term monitoring of invasive species is crucial, and that determining the relationship between the results of monitoring and environmental variables can be helpful in predicting the damage caused by invasive species resulting from environmental changes.
A new species of the genus Henricia Gray, 1840 that belongs to the family Echinasteridae is described from South Korea. Henricia epiphysialis sp. nov. has epiphyseal ossicles at the ends of the abactinal and lateral plates, and the abactinal and lateral spines form a hooked crown. The partial sequence of the mitochondrial COXI gene (537 bp) of H. epiphysialis sp. nov. was obtained, and the new species was morphologically and genetically compared with other related Henricia species.