Jean-Paul Armache

Dr. Jean-Paul Armache

Huck Institutes of the Life Sciences, University Park, TX, USA

Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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27 February 2017 in Nature Methods
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SZShawn Q Zheng
Shawn Q Zheng
EPEugene Palovcak
Eugene Palovcak
JAJean-Paul Armache
Jean-Paul Armache
KVKliment A Verba
Kliment A Verba
YCYifan Cheng
Yifan Cheng
DADavid A Agard
David A Agard

1 May 2013 in Nature
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Journal Article
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AAAndreas M. Anger
Andreas M. Anger
JAJean-Paul Armache
Jean-Paul Armache
OBOtto Berninghausen
Otto Berninghausen
MHMichael Habeck
Michael Habeck
Marion SubkleweMarion Subklewe
Marion Subklewe
RBRoland Beckmann
Roland Beckmann

8 April 2015 in Nature
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CPCandice E. Paulsen
Candice E. Paulsen
JAJean-Paul Armache
Jean-Paul Armache
YGYuan Gao
Yuan Gao
YCYifan Cheng
Yifan Cheng
DJDavid Julius
David Julius
The TRPA1 ion channel (also known as the wasabi receptor) is a detector of noxious chemical agents encountered in our environment or produced endogenously during tissue injury or drug metabolism. These include a broad class of electrophiles that activate the channel through covalent protein modification. TRPA1 antagonists hold potential for treating neurogenic inflammatory conditions provoked or exacerbated by irritant exposure. Despite compelling reasons to understand TRPA1 function, structural mechanisms underlying channel regulation remain obscure. Here we use single-particle electron cryo- microscopy to determine the structure of full-length human TRPA1 to ∼4 Å resolution in the presence of pharmacophores, including a potent antagonist. Several unexpected features are revealed, including an extensive coiled-coil assembly domain stabilized by polyphosphate co-factors and a highly integrated nexus that converges on an unpredicted transient receptor potential (TRP)-like allosteric domain. These findings provide new insights into the mechanisms of TRPA1 regulation, and establish a blueprint for structure-based design of analgesic and anti-inflammatory agents.

4 December 2009 in Science
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BSBirgit Seidelt
Birgit Seidelt
CIC. Axel Innis
C. Axel Innis
DWDaniel Wilson
Daniel Wilson
MGMarco Gartmann
Marco Gartmann
JAJean-Paul Armache
Jean-Paul Armache
RBRoland Beckmann
Roland Beckmann
Nascent Chains Revealed: Detailed analysis of protein translation and translocation across membranes requires the identification and structural analysis of intermediates involved in these processes (see the Perspective by Kampmann and Blobel ). Seidelt et al. (p. 1412 , published online 29 October) report the visualization by cryo-electron microscopy of a nascent polypeptide chain in the tunnel of the ribosome at 5.8 angstroms. This resolution allows analysis of the conformation and distinct contacts of the nascent chain within the ribosomal tunnel, which suggests a mechanism by which translational stalling is induced by this peptide. Protein translocation across cellular membranes involves the Sec61 protein, a component of a protein-conducting channel. Whether Sec61 acts as a monomer or as an oligomer during protein translocation has been unclear. Becker et al. (p. 1369 , published online 29 October) describe active yeast and mammalian ribosome-Sec61 structures that show the Sec61 complex interacting with the ribosome and a nascent secretory protein signal sequence. The analysis unambiguously reveals that the active protein-conducting channel is a single Sec61 copy with its central pore serving as conduit for the nascent polypeptide.

7 March 2016 in Nature Methods
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JFJens Frauenfeld
Jens Frauenfeld
RLRobin Löving
Robin Löving
JAJean-Paul Armache
Jean-Paul Armache
ASAndreas F-P Sonnen
Andreas F-P Sonnen
FGFatma Guettou
Fatma Guettou
PNPär Nordlund
Pär Nordlund
A saposin protein–lipid nanoparticle system stabilizes diverse, fragile membrane proteins in a lipid environment for structural and functional studies. A limiting factor in membrane protein research is the ability to solubilize and stabilize such proteins. Detergents are used most often for solubilizing membrane proteins, but they are associated with protein instability and poor compatibility with structural and biophysical studies. Here we present a saposin-lipoprotein nanoparticle system, Salipro, which allows for the reconstitution of membrane proteins in a lipid environment that is stabilized by a scaffold of saposin proteins. We demonstrate the applicability of the method on two purified membrane protein complexes as well as by the direct solubilization and nanoparticle incorporation of a viral membrane protein complex from the virus membrane. Our approach facilitated high-resolution structural studies of the bacterial peptide transporter PeptTSo2 by single-particle cryo-electron microscopy (cryo-EM) and allowed us to stabilize the HIV envelope glycoprotein in a functional state.

22 February 2012 in Nature
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TBThomas Becker
Thomas Becker
SFSibylle Franckenberg
Sibylle Franckenberg
SWStephan Wickles
Stephan Wickles
CSChristopher J. Shoemaker
Christopher J. Shoemaker
AAAndreas M. Anger
Andreas M. Anger
RBRoland Beckmann
Roland Beckmann