Yara Abidine

Dr. Yara Abidine

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Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 March 2018 in Biophysical Journal
Verified
Journal Article
Closed access
YAYara Abidine
Yara Abidine
ACAndrei Constantinescu
Andrei Constantinescu
VLValérie M. Laurent
Valérie M. Laurent
VRVinoth Sundar Rajan
Vinoth Sundar Rajan
RMRichard Michel
Richard Michel
CVClaude Verdier
Claude Verdier

1 February 2015 in Europhysics Letters
Verified
Journal Article
Open access
YAYara Abidine
Yara Abidine
VLValérie M. Laurent
Valérie M. Laurent
RMRichard Michel
Richard Michel
ADAlain Duperray
Alain Duperray
LPLiviu Iulian Palade
Liviu Iulian Palade
CVClaude Verdier
Claude Verdier

20 July 2021 in Cells
Verified
Journal Article
Open access
PDF file
Jared KiruiJared Kirui
Jared Kirui
YAYara Abidine
Yara Abidine
ALAnnasara Lenman
Annasara Lenman
KIKoushikul Islam
Koushikul Islam
YGYong-Dae Gwon
Yong-Dae Gwon
Gisa GeroldGisa Gerold
Gisa Gerold
Chikungunya virus (CHIKV) is a re-emerging, mosquito-transmitted, enveloped positive stranded RNA virus. Chikungunya fever is characterized by acute and chronic debilitating arthritis. Although multiple host factors have been shown to enhance CHIKV infection, the molecular mechanisms of cell entry and entry factors remain poorly understood. The phosphatidylserine-dependent receptors, T-cell immunoglobulin and mucin domain 1 (TIM-1) and Axl receptor tyrosine kinase (Axl), are transmembrane proteins that can serve as entry factors for enveloped viruses. Previous studies used pseudoviruses to delineate the role of TIM-1 and Axl in CHIKV entry. Conversely, here, we use the authentic CHIKV and cells ectopically expressing TIM-1 or Axl and demonstrate a role for TIM-1 in CHIKV infection. To further characterize TIM-1-dependent CHIKV infection, we generated cells expressing domain mutants of TIM-1. We show that point mutations in the phosphatidylserine binding site of TIM-1 lead to reduced cell binding, entry, and infection of CHIKV. Ectopic expression of TIM-1 renders immortalized keratinocytes permissive to CHIKV, whereas silencing of endogenously expressed TIM-1 in human hepatoma cells reduces CHIKV infection. Altogether, our findings indicate that, unlike Axl, TIM-1 readily promotes the productive entry of authentic CHIKV into target cells.

13 October 2015 in The European Physical Journal Plus
Verified
Journal Article
Open access
PDF file
YAYara Abidine
Yara Abidine
VLV. M. Laurent
V. M. Laurent
RMR. Michel
R. Michel
ADA. Duperray
A. Duperray
CVClaude Verdier
Claude Verdier

6 July 2021 in Cells
Verified
Journal Article
Open access
PDF file
YAYara Abidine
Yara Abidine
GAGiannetti Arianna
Giannetti Arianna
JRJean Revilloud
Jean Revilloud
VLValerie LAURENT
Valerie LAURENT
CVClaude Verdier
Claude Verdier
AFM-based rheology methods enable the investigation of the viscoelastic properties of cancer cells. Such properties are known to be essential for cell functions, especially for malignant cells. Here, the relevance of the force modulation method was investigated to characterize the viscoelasticity of bladder cancer cells of various invasiveness on soft substrates, revealing that the rheology parameters are a signature of malignancy. Furthermore, the collagen microenvironment affects the viscoelastic moduli of cancer cell spheroids; thus, collagen serves as a powerful proxy, leading to an increase of the dynamic moduli vs. frequency, as predicted by a double power law model. Taken together, these results shed new light on how cancer cells and tissues adapt their viscoelastic properties depending on their malignancy and the microenvironment. This method could be an attractive way to control their properties in the future, based on the similarity of spheroids with in vivo tumor models.

21 August 2022 in Viruses
Verified
Journal Article
Open access
PDF file
YAYara Abidine
Yara Abidine
LLLifeng Liu
Lifeng Liu
OWOskar Wallén
Oskar Wallén
ETEdward Trybala
Edward Trybala
SOSigvard Olofsson
Sigvard Olofsson
MBMarta Bally
Marta Bally
The diffusion of viruses at the cell membrane is essential to reach a suitable entry site and initiate subsequent internalization. Although many viruses take advantage of glycosaminoglycans (GAG) to bind to the cell surface, little is known about the dynamics of the virus–GAG interactions. Here, single-particle tracking of the initial interaction of individual herpes simplex virus 1 (HSV-1) virions reveals a heterogeneous diffusive behavior, regulated by cell-surface GAGs with two main diffusion types: confined and normal free. This study reports that different GAGs can have competing influences in mediating diffusion on the cells used here: chondroitin sulfate (CS) enhances free diffusion but hinders virus attachment to cell surfaces, while heparan sulfate (HS) promotes virus confinement and increases entry efficiency. In addition, the role that the viral mucin-like domains (MLD) of the HSV-1 glycoprotein C plays in facilitating the diffusion of the virus and accelerating virus penetration into cells is demonstrated. Together, our results shed new light on the mechanisms of GAG-regulated virus diffusion at the cell surface for optimal internalization. These findings may be extendable to other GAG-binding viruses.