Wei Li

Wei Li


Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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4 November 2022 in Frontiers in Neurology
Verified
Journal Article
Open access
YGYingwei Guo
Yingwei Guo
YYYingjian Yang
Yingjian Yang
FCFengqiu Cao
Fengqiu Cao
YLYang Liu
Yang Liu
WLWei Li
Wei Li
YKYan Kang
Yan Kang
Ischemic stroke has become a severe disease endangering human life. However, few studies have analyzed the radiomics features that are of great clinical significance for the diagnosis, treatment, and prognosis of patients with ischemic stroke. Due to sufficient cerebral blood flow information in dynamic susceptibility contrast perfusion-weighted imaging (DSC-PWI) images, this study aims to find the critical features hidden in DSC-PWI images to characterize hypoperfusion areas (HA) and normal areas (NA). This study retrospectively analyzed 80 DSC-PWI data of 56 patients with ischemic stroke from 2013 to 2016. For exploring features in HA and NA,13 feature sets (Fmethod) were obtained from different feature selection algorithms. Furthermore, these 13 Fmethod were validated in identifying HA and NA and distinguishing the proportion of ischemic lesions in brain tissue. In identifying HA and NA, the composite score (CS) of the 13 Fmethod ranged from 0.624 to 0.925. FLasso in the 13 Fmethod achieved the best performance with mAcc of 0.958, mPre of 0.96, mAuc of 0.982, mF1 of 0.959, and mRecall of 0.96. As to classifying the proportion of the ischemic region, the best CS was 0.786, with Acc of 0.888 and Pre of 0.863. The classification ability was relatively stable when the reference threshold (RT) was 0.25, the performance will gradually decrease as its increases. These results showed that radiomics features extracted from the Lasso algorithms could accurately reflect cerebral blood flow changes and classify HA and NA. Besides, In the event of ischemic stroke, the ability of radiomics features to distinguish the proportion of ischemic areas needs to be improved. Further research should be conducted on feature engineering, model optimization, and the universality of the algorithms in the future.

1 January 2022 in Mathematical Biosciences and Engineering
Verified
Journal Article
Open access
PDF file
YYYingjian Yang
Yingjian Yang
WLWei Li
Wei Li
YGYingwei Guo
Yingwei Guo
NZNanrong Zeng
Nanrong Zeng
SWShicong Wang
Shicong Wang
YKYan Kang
Yan Kang
Computed tomography (CT) has been the most effective modality for characterizing and quantifying chronic obstructive pulmonary disease (COPD). Radiomics features extracted from the region of interest in chest CT images have been widely used for lung diseases, but they have not yet been extensively investigated for COPD. Therefore, it is necessary to understand COPD from the lung radiomics features and apply them for COPD diagnostic applications, such as COPD stage classification. Lung radiomics features are used for characterizing and classifying the COPD stage in this paper. First, 19 lung radiomics features are selected from 1316 lung radiomics features per subject by using Lasso. Second, the best performance classifier (multi-layer perceptron classifier, MLP classifier) is determined. Third, two lung radiomics combination features, Radiomics-FIRST and Radiomics-ALL, are constructed based on 19 selected lung radiomics features by using the proposed lung radiomics combination strategy for characterizing the COPD stage. Lastly, the 19 selected lung radiomics features with Radiomics-FIRST/Radiomics-ALL are used to classify the COPD stage based on the best performance classifier. The results show that the classification ability of lung radiomics features based on machine learning (ML) methods is better than that of the chest high-resolution CT (HRCT) images based on classic convolutional neural networks (CNNs). In addition, the classifier performance of the 19 lung radiomics features selected by Lasso is better than that of the 1316 lung radiomics features. The accuracy, precision, recall, F1-score and AUC of the MLP classifier with the 19 selected lung radiomics features and Radiomics-ALL were 0.83, 0.83, 0.83, 0.82 and 0.95, respectively. It is concluded that, for the chest HRCT images, compared to the classic CNN, the ML methods based on lung radiomics features are more suitable and interpretable for COPD classification. In addition, the proposed lung radiomics combination strategy for characterizing the COPD stage effectively improves the classifier performance by 12% overall (accuracy: 3%, precision: 3%, recall: 3%, F1-score: 2% and AUC: 1%).

21 April 2022 in Frontiers in Medicine
Verified
Journal Article
Open access
YYYingjian Yang
Yingjian Yang
WLWei Li
Wei Li
YGYingwei Guo
Yingwei Guo
YLYang Liu
Yang Liu
QLQiang Li
Qiang Li
YKYan Kang
Yan Kang
Background: Chronic obstructive pulmonary disease (COPD), a preventable lung disease, has the highest prevalence in the elderly and deserves special consideration regarding earlier warnings in this fragile population. The impact of age on COPD is well known, but the COPD risk of the aging process in the lungs remains unclear. Therefore, it is necessary to understand the COPD risk of the aging process in the lungs, providing an early COPD risk decision for adults.Methods: COPD risk is evaluated for adults to make an early COPD risk decision from the perspective of lung radiomics features. First, the subjects are divided into four groups according to the COPD stages. Their ages are divided into eight equal age intervals in each group. Second, four survival Cox models are established based on the lung radiomics features to evaluate the risk probability from COPD stage 0 to suffering COPD and COPD stages. Finally, four risk ranks are defined by equally dividing the COPD risk probability from 0 to 1. Subsequently, the COPD risk at different stages is evaluated with varying age intervals to provide an early COPD risk decision.Results: The evaluation metrics area under the curve (AUC)/C index of four survival Cox models are 0.87/0.94, 0.84/0.83, 0.94/0.89, and 0.97/0.86, respectively, showing the effectiveness of the models. The risk rank levels up every 5 years for the subjects who had suffered COPD after 60. For the subjects with COPD stage 0, the risk rank of suffering COPD stage I levels up every 5 years after the age of 65 years, and the risk rank of suffering COPD stages II and III & IV levels up every 5 years after the age of 70 years.Conclusion: Once the age is above 60 years, the patients with COPD need to take action to prevent the progress and deterioration of COPD. Once the age is above 65 years, the patients with COPD stage 0 need to take precautions against COPD.

20 September 2022 in Diagnostics
Verified
Journal Article
Open access
PDF file
Yang YingjianYang Yingjian
Yang Yingjian
SWShicong Wang
Shicong Wang
NZNANRONG ZENG
NANRONG ZENG
WDWenxin Duan
Wenxin Duan
ZCziran chen
ziran chen
YKYan Kang
Yan Kang
Chronic obstructive pulmonary disease (COPD) is a preventable, treatable, progressive chronic disease characterized by persistent airflow limitation. Patients with COPD deserve special consideration regarding treatment in this fragile population for preclinical health management. Therefore, this paper proposes a novel lung radiomics combination vector generated by a generalized linear model (GLM) and Lasso algorithm for COPD stage classification based on an auto-metric graph neural network (AMGNN) with a meta-learning strategy. Firstly, the parenchyma images were segmented from chest high-resolution computed tomography (HRCT) images by ResU-Net. Second, lung radiomics features are extracted from the parenchyma images by PyRadiomics. Third, a novel lung radiomics combination vector (3 + 106) is constructed by the GLM and Lasso algorithm for determining the radiomics risk factors (K = 3) and radiomics node features (d = 106). Last, the COPD stage is classified based on the AMGNN. The results show that compared with the convolutional neural networks and machine learning models, the AMGNN based on constructed novel lung radiomics combination vector performs best, achieving an accuracy of 0.943, precision of 0.946, recall of 0.943, F1-score of 0.943, and ACU of 0.984. Furthermore, it is found that our method is effective for COPD stage classification.

1 January 2022 in Mathematical Biosciences and Engineering
Verified
Journal Article
Open access
PDF file
YYYingjian Yang
Yingjian Yang
WLWei Li
Wei Li
YKYan Kang
Yan Kang
YGYingwei Guo
Yingwei Guo
KYKai Yang
Kai Yang
LCLtd Shenzhen Happy-Growing Intelligent Co.
Ltd Shenzhen Happy-Growing Intelligent Co.
The resting HR is an upward trend with the development of chronic obstructive pulmonary disease (COPD) severity. Chest computed tomography (CT) has been regarded as the most effective modality for characterizing and quantifying COPD. Therefore, CT images should provide more information to analyze the lung and heart relationship. The relationship between HR variability and PFT or/and COPD has been fully revealed, but the relationship between resting HR variability and COPD radiomics features remains unclear. 231 sets of chest high-resolution CT (HRCT) images from "COPD patients" (at risk of COPD and stage I to IV) are segmented by the trained lung region segmentation model (ResU-Net). Based on the chest HRCT images and lung segmentation images, 231 sets of the original lung parenchyma images are obtained. 1316 COPD radiomics features of each subject are calculated by the original lung parenchyma images and its derived lung parenchyma images. The 13 selected COPD radiomics features related to the resting HR are generated from the Lasso model. A COPD radiomics features combination strategy is proposed to satisfy the significant change of the lung radiomics feature among the different COPD stages. Results show no significance between COPD stage Ⅰ and COPD stage Ⅱ of the 13 selected COPD radiomics features, and the lung radiomics feature Y1-Y4 (P > 0.05). The lung radiomics feature F2 with the dominant selected COPD radiomics features based on the proposed COPD radiomics features combination significantly increases with the development of COPD stages (P < 0.05). It is concluded that the lung radiomics feature F2 with the dominant selected COPD radiomics features not only can characterize the resting HR but also can characterize the COPD stage evolution.

8 July 2022 in Diagnostics
Verified
Journal Article
Open access
PDF file
YGYingwei Guo
Yingwei Guo
Yang YingjianYang Yingjian
Yang Yingjian
FCFengqiu Cao
Fengqiu Cao
WLWei Li
Wei Li
MWMingming Wang
Mingming Wang
YKYan Kang
Yan Kang
Background: Accurate outcome prediction is of great clinical significance in customizing personalized treatment plans, reducing the situation of poor recovery, and objectively and accurately evaluating the treatment effect. This study intended to evaluate the performance of clinical text information (CTI), radiomics features, and survival features (SurvF) for predicting functional outcomes of patients with ischemic stroke. Methods: SurvF was constructed based on CTI and mRS radiomics features (mRSRF) to improve the prediction of the functional outcome in 3 months (90-day mRS). Ten machine learning models predicted functional outcomes in three situations (2-category, 4-category, and 7-category) using seven feature groups constructed by CTI, mRSRF, and SurvF. Results: For 2-category, ALL (CTI + mRSRF+ SurvF) performed best, with an mAUC of 0.884, mAcc of 0.864, mPre of 0.877, mF1 of 0.86, and mRecall of 0.864. For 4-category, ALL also achieved the best mAuc of 0.787, while CTI + SurvF achieved the best score with mAcc = 0.611, mPre = 0.622, mF1 = 0.595, and mRe-call = 0.611. For 7-category, CTI + SurvF performed best, with an mAuc of 0.788, mPre of 0.519, mAcc of 0.529, mF1 of 0.495, and mRecall of 0.47. Conclusions: The above results indicate that mRSRF + CTI can accurately predict functional outcomes in ischemic stroke patients with proper machine learning models. Moreover, combining SurvF will improve the prediction effect compared with the original features. However, limited by the small sample size, further validation on larger and more varied datasets is necessary.