Blake Schaeffer

Dr. Blake Schaeffer


Research Focus & Metrics

Academic Career Length

22Years (2005-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 August 2019 in Frontiers in Marine Science
Verified
Journal Article
Open access
SGSteve Groom
Steve Groom
Shubha SathyendranathShubha Sathyendranath
Shubha Sathyendranath
YBYai Ban
Yai Ban
SBStewart Bernard
Stewart Bernard
RBRobert Brewin
Robert Brewin
MWMenghua Wang
Menghua Wang
Spectrally-resolved water-leaving radiances (ocean colour) and inferred chlorophyll concentration are key to studying phytoplankton dynamics at seasonal and inter-annual scales, for a better understanding of the role of phytoplankton in marine biogeochemistry; the global carbon cycle; and the response of marine ecosystems to climate variability, change and feedback processes. Ocean colour data also have a critical role in operational observation systems monitoring coastal eutrophication, harmful algal blooms, and sediment plumes. The contiguous ocean-colour record reached 21 years in 2018; however, it is comprised of a number of one-off missions such that creating a consistent time-series of ocean-colour data requires merging of the individual sensors (including MERIS, Aqua-MODIS, SeaWiFS, VIIRS and OLCI) with differing sensor characteristics, without introducing artefacts. By contrast, the next decade will see consistent observations from operational ocean colour series with sensors of similar design and with a replacement strategy. Also, by 2029 the record will start to be of sufficient duration to discriminate climate change impacts from natural variability, at least in some regions. This paper describes current status and future prospects in the field of ocean colour focussing on large to medium resolution observations of oceans and coastal seas. It reviews the user requirements in terms of products and uncertainty characteristics and then describes features of current and future satellite ocean-colour sensors, both operational and innovative. The key role of in situ validation and calibration is highlighted as are ground segments that process the data received from the ocean-colour sensors and deliver analysis-ready products to end-users. Example applications of the ocean-colour data are presented, focussing on the climate data record and operational applications including water quality and assimilation into numerical models. Current capacity building and training activities pertinent to ocean are described and finally a summary of future perspectives is provided.

14 March 2018 in Optics Express
Verified
Journal Article
Open access
PDF file
BSBridget Noreen Seegers
Bridget Noreen Seegers
RSRichard P. Stumpf
Richard P. Stumpf
BSBlake Schaeffer
Blake Schaeffer
KLKeith A. Loftin
Keith A. Loftin
PWP. Jeremy Werdell
P. Jeremy Werdell
Performance assessment of ocean color satellite data has generally relied on statistical metrics chosen for their common usage and the rationale for selecting certain metrics is infrequently explained. Commonly reported statistics based on mean squared errors, such as the coefficient of determination (r2), root mean square error, and regression slopes, are most appropriate for Gaussian distributions without outliers and, therefore, are often not ideal for ocean color algorithm performance assessment, which is often limited by sample availability. In contrast, metrics based on simple deviations, such as bias and mean absolute error, as well as pair-wise comparisons, often provide more robust and straightforward quantities for evaluating ocean color algorithms with non-Gaussian distributions and outliers. This study uses a SeaWiFS chlorophyll-a validation data set to demonstrate a framework for satellite data product assessment and recommends a multi-metric and user-dependent approach that can be applied within science, modeling, and resource management communities.

8 August 2013 in International Journal of Remote Sensing
Verified
Journal Article
Closed access
BSBlake Schaeffer
Blake Schaeffer
KSKelly G. Schaeffer
Kelly G. Schaeffer
DKDarryl Keith
Darryl Keith
RLRoss S. Lunetta
Ross S. Lunetta
RCRobyn Conmy
Robyn Conmy
RGRichard Gould
Richard Gould
Sustainable practices require a long-term commitment to creating solutions to environmental, social, and economic issues. The most direct way to ensure that management practices achieve sustainability is to monitor the environment. Remote sensing technology has the potential to accelerate the engagement of communities and managers in the implementation and performance of best management practices. Over the last few decades, satellite technology has allowed measurements on a global scale over long time periods, and is now proving useful in coastal waters, estuaries, lakes, and reservoirs, which are relevant to water quality managers. Comprehensive water quality climate data records have the potential to provide rapid water quality assessments, thus providing new and enhanced decision analysis methodologies and improved temporal/spatial diagnostics. To best realize the full application potential of these emerging technologies an open and effective dialogue is needed between scientists, policy makers, environmental managers, and stakeholders at the federal, state, and local levels. Results from an internal US Environmental Protection Agency qualitative survey were used to determine perceptions regarding the use of satellite remote sensing for monitoring water quality. The goal of the survey was to begin understanding why management decisions do not typically rely on satellite-derived water quality products.

6 March 2018 in Ecological Applications
Verified
Journal Article
Open access
PDF file
FMFrank Muller-Karger
Frank Muller-Karger
EHErin Hestir
Erin Hestir
CAChristiana Ade
Christiana Ade
KTKevin Turpie
Kevin Turpie
DRDar A. Roberts
Dar A. Roberts
WJWalter Jetz
Walter Jetz
The biodiversity and high productivity of coastal terrestrial and aquatic habitats are the foundation for important benefits to human societies around the world. These globally distributed habitats need frequent and broad systematic assessments, but field surveys only cover a small fraction of these areas. Satellite‐based sensors can repeatedly record the visible and near‐infrared reflectance spectra that contain the absorption, scattering, and fluorescence signatures of functional phytoplankton groups, colored dissolved matter, and particulate matter near the surface ocean, and of biologically structured habitats (floating and emergent vegetation, benthic habitats like coral, seagrass, and algae). These measures can be incorporated into Essential Biodiversity Variables (EBVs), including the distribution, abundance, and traits of groups of species populations, and used to evaluate habitat fragmentation. However, current and planned satellites are not designed to observe the EBVs that change rapidly with extreme tides, salinity, temperatures, storms, pollution, or physical habitat destruction over scales relevant to human activity. Making these observations requires a new generation of satellite sensors able to sample with these combined characteristics: (1) spatial resolution on the order of 30 to 100‐m pixels or smaller; (2) spectral resolution on the order of 5 nm in the visible and 10 nm in the short‐wave infrared spectrum (or at least two or more bands at 1,030, 1,240, 1,630, 2,125, and/or 2,260 nm) for atmospheric correction and aquatic and vegetation assessments; (3) radiometric quality with signal to noise ratios (SNR) above 800 (relative to signal levels typical of the open ocean), 14‐bit digitization, absolute radiometric calibration <2%, relative calibration of 0.2%, polarization sensitivity <1%, high radiometric stability and linearity, and operations designed to minimize sunglint; and (4) temporal resolution of hours to days. We refer to these combined specifications as H4 imaging. Enabling H4 imaging is vital for the conservation and management of global biodiversity and ecosystem services, including food provisioning and water security. An agile satellite in a 3‐d repeat low‐Earth orbit could sample 30‐km swath images of several hundred coastal habitats daily. Nine H4 satellites would provide weekly coverage of global coastal zones. Such satellite constellations are now feasible and are used in various applications.

1 September 2017 in Ecological Indicators
Verified
Journal Article
Open access
JCJohn M. Clark
John M. Clark
BSBlake Schaeffer
Blake Schaeffer
JDJohn A. Darling
John A. Darling
EUErin A. Urquhart
Erin A. Urquhart
John M. JohnstonJohn M. Johnston
John M. Johnston
RSRichard P. Stumpf
Richard P. Stumpf
Cyanobacterial harmful algal blooms (cyanoHAB) cause extensive problems in lakes worldwide, including human and ecological health risks, anoxia and fish kills, and taste and odor problems. CyanoHABs are a particular concern in both recreational waters and drinking source waters because of their dense biomass and the risk of exposure to toxins. Successful cyanoHAB assessment using satellites may provide an indicator for human and ecological health protection, In this study, methods were developed to assess the utility of satellite technology for detecting cyanoHAB frequency of occurrence at locations of potential management interest. The European Space Agency's MEdium Resolution Imaging Spectrometer (MERIS) was evaluated to prepare for the equivalent series of Sentine1-3 Ocean and Land Colour Imagers (OLCI) launched in 2016 as part of the Copernicus program. Based on the 2012 National Lakes Assessment site evaluation guidelines and National Hydrography Dataset, the continental United States contains 275,897 lakes and reservoirs >1 hectare in area. Results from this study show that 5.6 % of waterbodies were resolvable by satellites with 300 m single-pixel resolution and 0.7 % of waterbodies were resolvable when a three by three pixel (3×3-pixel) array was applied based on minimum Euclidian distance from shore. Satellite data were spatially joined to U.S. public water surface intake (PWSI) locations, where single-pixel resolution resolved 57% of the PWSI locations and a 3×3-pixel array resolved 33% of the PWSI locations. Recreational and drinking water sources in Florida and Ohio were ranked from 2008 through 2011 by cyanoHAB frequency above the World Health Organization’s (WHO) high threshold for risk of 100,000 cells mL−1. The ranking identified waterbodies with values above the WHO high threshold, where Lake Apopka, FL (99.1 %) and Grand Lake St. Marys, OH (83 %) had the highest observed bloom frequencies per region. The method presented here may indicate locations with high exposure to cyanoHABs and therefore can be used to assist in prioritizing management resources and actions for recreational and drinking water sources.

1 February 2015 in Remote Sensing of Environment
Verified
Journal Article
Closed access
RLRoss S. Lunetta
Ross S. Lunetta
BSBlake Schaeffer
Blake Schaeffer
RSRichard P. Stumpf
Richard P. Stumpf
DKDarryl Keith
Darryl Keith
SJScott A. Jacobs
Scott A. Jacobs
MMMark S. Murphy
Mark S. Murphy