Abhishek Dey

Dr. Abhishek Dey

Department of Biotechnology, National Institute of Pharmaceutical Education and Research, Raebareli, India
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Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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Journal Article
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Abhishek DeyAbhishek Dey
Abhishek Dey
KCKausik Chakrabarti
Kausik Chakrabarti
Replicative capacity of a cell is strongly correlated with telomere length regulation. Aberrant lengthening or reduction in the length of telomeres can lead to health anomalies, such as cancer or premature aging. Telomerase is a master regulator for maintaining replicative potential in most eukaryotic cells. It does so by controlling telomere length at chromosome ends. Akin to cancer cells, most single-cell eukaryotic pathogens are highly proliferative and require persistent telomerase activity to maintain constant length of telomere and propagation within their host. Although telomerase is key to unlimited cellular proliferation in both cases, not much was known about the role of telomerase in human parasites (malaria, Trypanosoma, etc.) until recently. Since telomerase regulation is mediated via its own structural components, interactions with catalytic reverse transcriptase and several factors that can recruit and assemble telomerase to telomeres in a cell cycle-dependent manner, we compare and discuss here recent findings in telomerase biology in cancer, aging and parasitic diseases to give a broader perspective of telomerase function in human diseases.

22 January 2025 in Functional & Integrative Genomics
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Dipali Barku DongareDipali Barku Dongare
Dipali Barku Dongare
SNShaik Shireen Nishad
Shaik Shireen Nishad
SMSakshi Y. Mastoli
Sakshi Y. Mastoli
SSShubhini A. Saraf
Shubhini A. Saraf
NSNidhi Srivastava
Nidhi Srivastava
Abhishek DeyAbhishek Dey
Abhishek Dey

31 July 2024 in RNA
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Journal Article
Open access
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Abhishek DeyAbhishek Dey
Abhishek Dey
SYShuting Yan
Shuting Yan
Tamar SchlickTamar Schlick
Tamar Schlick
ALAlain Laederach
Alain Laederach
The SARS-CoV-2 frameshifting element (FSE) has been intensely studied and explored as a therapeutic target for coronavirus diseases, including COVID-19. Besides the intriguing virology, this small RNA is known to adopt many length-dependent conformations, as verified by multiple experimental and computational approaches. However, the role these alternative conformations play in the frameshifting mechanism and how to quantify this structural abundance has been an ongoing challenge. Here, we show by DMS and dual-luciferase functional assays that previously predicted FSE mutants (using the RAG graph theory approach) suppress structural transitions and abolish frameshifting. Furthermore, correlated mutation analysis of DMS data by three programs (DREEM, DRACO, and DANCE-MaP) reveals important differences in their estimation of specific RNA conformations, suggesting caution in the interpretation of such complex conformational landscapes. Overall, the abolished frameshifting in three different mutants confirms that all alternative conformations play a role in the pathways of ribosomal transition.

10 August 2023 in Non-Coding RNA
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Journal Article
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Abhishek DeyAbhishek Dey
Abhishek Dey
Pre-miR-675 is a microRNA expressed from the exon 1 of H19 long noncoding RNA, and the atypical expression of pre-miR-675 has been linked with several diseases and disorders including cancer. To execute its function inside the cell, pre-miR-675 is folded into a particular conformation, which aids in its interaction with several other biological molecules. However, the exact folding dynamics of pre-miR-675 and its protein-binding motifs are currently unknown. Moreover, how H19 lncRNA and pre-miR-675 crosstalk and modulate each other’s activities is also unclear. The detailed structural analysis of pre-miR-675 in this study determines its earlier unknown conformation and identifies novel protein-binding sites on pre-miR-675, thus making it an excellent therapeutic target against cancer. Co-folding analysis between H19 lncRNA and pre-miR-675 determine structural transformations in pre-miR-675, thus describing the earlier unknown mechanism of interaction between these two molecules. Comprehensively, this study details the conformation of pre-miR-675 and its protein-binding sites and explains its relationship with H19 lncRNA, which can be interpreted to understand the role of pre-miR-675 in the development and progression of tumorigenesis and designing new therapeutics against cancers.


22 January 2026 in Molecular Biology Reports
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Journal Article
Closed access
SSSayani Saha
Sayani Saha
SRSaurabh Pratap Singh Rathour
Saurabh Pratap Singh Rathour
GNGokul. G. Nair
Gokul. G. Nair
Abhishek DeyAbhishek Dey
Abhishek Dey
NSNidhi Srivastava
Nidhi Srivastava