Knowledge of rangewide variation in DNA content and ploidy level may be valuable in understanding the evolutionary history of a species. Recent studies of Acacia senegal report diploids and occasional tetraploids in the Sudano-Sahelian region of sub-Saharan Africa, but nothing is known about the overall extent of DNA ploidy variation within the species. In this study, we determine the DNA content and ploidy level of A. senegal across its native range, and explore whether the variation is related to its evolutionary and colonization history. We used propidium iodide flow cytometry (FCM) to estimate DNA content (2C value) and infer ploidy in 157 individuals from 54 populations on various tissues, using seeds, fresh leaves, dried leaves and twigs and herbarium specimens. The mean 2C DNA (pg ± s.d.) contents detected were 1.47 ± 0.09, 2.12 ± 0.02, 2.89 ± 0.12, and a single individual with 4.51 pg, corresponding to a polyploid series of diploid, triploid, tetraploid and hexaploid individuals. Diploids were confirmed by chromosome counts (2n = 2x = 26). Most populations (90.7 %) were of single ploidy level, while mixed ploidy populations (9.3 %) comprising mostly diploids (2x+3x, 2x+4x and 2x+6x) were restricted to the Sudano-Sahelian and Indian subcontinent regions, its northern range. The species is predominantly diploid, and no mixed ploidy populations were detected in east and southern Africa, its southern range. The geographic pattern of ploidy variation in conjunction with existing phylogeographic and phylogenetic data of the species suggests that polyploids have occurred multiple times in its evolutionary and recent colonization history, including contemporary ecological timescales. The successful use of external tissues of dried twigs in FCM is new, and presents the opportunity to study numerous other dryland woody species.
Jatropha curcas L is an economically potential tree species gaining interest globally because of its feasible contribution towards production of commercial biofuel. Little is known however, of its genetic variation patterns within Kenyan accessions for maximum exploitation. Eight populations covering most of its distribution range in Kenya were sampled and leaves of 160 individual trees collected. Analysis of molecular diversity was carried out using random amplified polymorphic DNA (RAPD) markers. Ten random primers generated 251 loci that were scored for diversity. Shannon's diversity index varied from 0.116 (Likoni) to 0.360 (Namanga). Analyses of molecular variance (AMOVA) showed that, more variation (53%; P =0.01) was partitioned among populations while 47% (P = 0.01) variation was partitioned within populations. Nested analysis of variance showed no variation across regions (0%; P > 0.01). The level of genetic structure and diversity may be explained by the modes of germplasm introductions and the biological traits of J. curcas. Based on these results, Jatropha accessions are quite variable and seeds collected from various populations are bound to exhibit wide variation. Selection of aJ. curcas breeding population should encompass a large number of individuals across all accessions in order to capture the wide genetic variation. Key words: Genetic diversity, population structure, Jatropha curcas, biofuel.
26 August 2021 in International Journal of Forestry Research
Carissa edulis is a tropical plant belonging to the family Apocynaceae. The species is widely used in the preparation of various herbal medicines. Earlier works in Kenya show that an aqueous extract from the roots of C. edulis has remarkable anti-herpes simplex virus. Due to its medicinal value, the species has been overexploited in its natural range and requires conservation interventions. Studies show that the species has beneficial relationships with arbuscular mycorrhizal fungi (AMF) that can enhance restoration of its population; however, no study has been undertaken to document the diversity of these AMF species. This study evaluated the genetic diversity of AMF associated with the roots of C. edulis within Lake Victoria basin ecosystem of Kenya. A cross-sectional, laboratory-based prospective study was carried out from roots of C. edulis collected from six sites within the ecosystem. Root samples were collected from 6 points (replicates) per site. AMF was assessed through morphological characterization and sequencing of small subunit of ribosomal DNA. Morphological identification identified four genera of AMF (Gigaspora, Acaulospora, Scutellospora, and Glomus) with no significant difference among the sites. Molecular analysis also revealed presence of four genera, but only two (Glomus and Acaulospora) were common for both the analyses with Glomus as the most predominant genera. In all the sites, there were large numbers of spores both in soil and in the roots confirming the association between C. edulis and AMF.
1 January 2016 in International Journal of Forestry Research
Leafing, flowering, and fruiting patterns ofSenegalia senegalwere studied over a period of 24 months from January 2014 to December 2015. The phenological events of the species are bimodal and follow the rainfall patterns. The leafing phase starts during the onset of rains and lasts for 18 weeks. New leaves continued to appear on the new shoots while old leaves persisted to the leaf fall period. Flowering event takes 12 weeks and is concentrated in the months of high relative humidity (April and October) with one-month peak flowering period. Fruiting phase starts at the peak of the rainy seasons (May and November) and peaks in June and December. This phase lasted for 14 weeks. The fruits mature towards the end of the rainy season (January/February and July/August). The fruits open for dispersal mainly in February/March and September during the peak dry season. High synchrony index (SI) was found in leafing (SI: 0.87), flowering (SI: 0.75), and fruiting (SI: 0.85) events among the populations. Temperature, precipitation, and soil moisture content were significantly correlated with the phenological events. Significant variations in floral morphology and fruits traits were also evident. Seed collections should be undertaken in the months of January/February and July/August.