Chris Faulkes

Dr. Chris Faulkes

orcid

Research Focus & Metrics

Academic Career Length

24Years (2003-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
10 August 2023 in Nature Aging
Verified
Journal Article
Open access
PDF file
ALA. T. Lu
A. T. Lu
ZFZ. Fei
Z. Fei
AHA. Haghani
A. Haghani
TRT. R. Robeck
T. R. Robeck
JZJoseph Zoller
Joseph Zoller
SHSteve Horvath
Steve Horvath
Aging, often considered a result of random cellular damage, can be accurately estimated using DNA methylation profiles, the foundation of pan-tissue epigenetic clocks. Here, we demonstrate the development of universal pan-mammalian clocks, using 11,754 methylation arrays from our Mammalian Methylation Consortium, which encompass 59 tissue types across 185 mammalian species. These predictive models estimate mammalian tissue age with high accuracy (r > 0.96). Age deviations correlate with human mortality risk, mouse somatotropic axis mutations and caloric restriction. We identified specific cytosines with methylation levels that change with age across numerous species. These sites, highly enriched in polycomb repressive complex 2-binding locations, are near genes implicated in mammalian development, cancer, obesity and longevity. Our findings offer new evidence suggesting that aging is evolutionarily conserved and intertwined with developmental processes across all mammals.

19 January 2004 in Molecular Ecology
Verified
Journal Article
Closed access
PDF file
CFChris Faulkes
Chris Faulkes
EVE. Verheyen
E. Verheyen
WVW. Verheyen
W. Verheyen
JJJ. U. M. Jarvis
J. U. M. Jarvis
Nigel C. Charles BennettNigel C. Charles Bennett
Nigel C. Charles Bennett

19 May 2013 in Philosophical Transactions of the Royal Society B: Biological Sciences
Verified
Journal Article
Closed access
CFChris Faulkes
Chris Faulkes
Nigel C. Charles BennettNigel C. Charles Bennett
Nigel C. Charles Bennett
Here, we review comparative studies of African mole-rats (family Bathyergidae) to explain how constraints acting at the ultimate (environmental) and proximate (organismal) levels have led to convergent gains and losses of sociality within this extensive adaptive radiation of subterranean rodents endemic to sub-Saharan Africa. At the ultimate level, living in environments that range from mesic through to arid has led to both variation and flexibility in social organization among species, culminating in the pinnacle of social evolution in the eusocial naked and Damaraland mole-rats ( Heterocephalus glaber and Fukomys damarensis ). The common mole-rat ( Cryptomys hottentotus ) provides a model example of how plasticity in social traits exists within a single species inhabiting areas with different ecological constraint. At the proximate level, reproductive strategies and cooperative breeding may be constrained by the correlated evolution of a suite of traits including physiological suppression of reproduction, the development of physiological and morphological castes, and the mode of ovulatory control and seasonality in breeding. Furthermore, recent neurobiological advances indicate that differential patterns of neurotransmitter expression within the forebrain may underpin (and limit) either a solitary or group living/cooperative lifestyle not only in mole-rats, but also more widely among disparate mammalian taxa.

23 December 2021 in Nature Aging
Verified
Journal Article
Open access
PDF file
SHSteve Horvath
Steve Horvath
AHAmin Haghani
Amin Haghani
NMNicholas Macoretta
Nicholas Macoretta
JAJulia Ablaeva
Julia Ablaeva
JZJoseph Zoller
Joseph Zoller
VGVera Gorbunova
Vera Gorbunova
Naked mole rats (NMRs) live an exceptionally long life, appear not to exhibit age-related decline in physiological capacity and are resistant to age-related diseases. However, it has been unknown whether NMRs also evade aging according to a primary hallmark of aging: epigenetic changes. To address this question, we profiled n = 385 samples from 11 tissue types at loci that are highly conserved between mammalian species using a custom array (HorvathMammalMethylChip40). We observed strong epigenetic aging effects and developed seven highly accurate epigenetic clocks for several tissues (pan-tissue, blood, kidney, liver, skin clocks) and two dual-species (human–NMR) clocks. The skin clock correctly estimated induced pluripotent stem cells derived from NMR fibroblasts to be of prenatal age. The NMR epigenetic clocks revealed that breeding NMR queens age more slowly than nonbreeders, a feature that is also observed in some eusocial insects. Our results show that despite a phenotype of negligible senescence, the NMR ages epigenetically.

9 July 2004 in Molecular Ecology
Verified
Journal Article
Closed access
PDF file
TBTamsin M. Burland
Tamsin M. Burland
Nigel C. Charles BennettNigel C. Charles Bennett
Nigel C. Charles Bennett
JJJennifer U. M. Jarvis
Jennifer U. M. Jarvis
CFChris Faulkes
Chris Faulkes

1 September 2005 in Nature
Verified
Journal Article
Closed access
PDF file
SRStephen J. Rossiter
Stephen J. Rossiter
RRRoger D. Ransome
Roger D. Ransome
CFChris Faulkes
Chris Faulkes
SCSteven C. Le Comber
Steven C. Le Comber
GJGareth Jones
Gareth Jones