SERDAR KARAKURT

Prof. Dr. SERDAR KARAKURT

orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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14 April 2016 in Anti-Cancer Agents in Medicinal Chemistry
Verified
Journal Article
Closed access
SKSERDAR KARAKURT
SERDAR KARAKURT
OAOrhan Adali
Orhan Adali
The aim of this study was to investigate the effects of plant phenolic compound tannic acid (TA) on proliferative, metastatic, invasive properties of prostate cancer (PCa) cells, PC-3 and LNCaP, as well as drug metabolizing and antioxidant enzymes. Characterization of TA was done by using FT-IR and NMR. TA dose dependently inhibited proliferation of PC-3 and LNCaP cells with IC50 values 35.3 µM and 29.1 µM, respectively. Wound healing assay showed that TA significantly inhibited (92.7%) migration of PCa cells (p<0.0001). TA was found to have anti-invasive potential on PC-3 cells. Treatment with TA inhibited (80.9%, p<0.0001) invasion of PC-3 cells into matrigel. Only 17.8% of PC-3 cells can form colony in the 0.7% agarose after TA treatment at the IC50 value concentration. Flow cytometry analyses with Annexin V-APC and 7-AAD staining demonstrated that TA increases early apoptosis rate of PC-3 cells by 25.8% and LNCaP cells by 20.9%. Western blot and qRT-PCR analyses also demonstrated that TA regulates protein and mRNA expression of CYP17A1, CYP3A4, CYP2B6, NQO1, GSTM1 and GSTP1 enzymes. The results obtained from this study shows that TA might be a good candidate for combinational therapy and highly effective strategic molecule for reducing the occurrence of PCa.

15 October 2016 in Acta Pharmaceutica
Verified
Journal Article
Open access
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SKSERDAR KARAKURT
SERDAR KARAKURT
Expression of a drug and xenobiotic metabolizing enzymes, cytochrome P450s (CYPs), and antioxidant enzymes can be modulated by various factors. The flavonoid rutin was investigated for its anti-carcinogen and protective effects as well as modulatory action on CYPs and phase II enzymes in human hepatocellular carcinoma cells. Rutin inhibited proliferation of HEPG2 cells in a dose-dependent manner with the IC50 value of 52.7 μmol L-1 and invasion of HEPG2 cells (21.6 %, p = 0.0018) and colony formation of those invaded cells (57.4 %, p < 0.0001). Rutin treatment also significantly increased early/late-stage apoptosis in HEPG2 cells (28.9 %, p < 0.001). Treatment by rutin significantly inhibited protein expressions of cytochrome P450-dependent CYP3A4 (75.3 %, p < 0.0001), elevated CYP1A1 enzymes (1.7-fold, p = 0.0084) and increased protein expressions of antioxidant and phase II reaction catalyzing enzymes, NQO1 (2.42-fold, p < 0.0001) and GSTP1 (2.03-fold, p < 0.0001). Besides, rutin treatment significantly inhibited mRNA expression of CYP3A4 (73.2 %, p=0.0014). Also, CYP1A1, NQO1 and GSTP1 mRNA expressions were significantly increased 2.77-fold (p = 0.029), 4.85- fold (p = 0.0051) and 9.84-fold (p < 0.0001), respectively.

1 January 2020 in Bioorganic Chemistry
Verified
Journal Article
Closed access
MOMehmet Oguz
Mehmet Oguz
AGAlev Gul
Alev Gul
SKSERDAR KARAKURT
SERDAR KARAKURT
MYMustafa Yilmaz
Mustafa Yilmaz

13 October 2020 in TURKISH JOURNAL OF BIOLOGY
Verified
Journal Article
Open access
SKSERDAR KARAKURT
SERDAR KARAKURT
GAGULSUM ABUSOGLU
GULSUM ABUSOGLU
ZAZekiye Ceren Arituluk Aydın
Zekiye Ceren Arituluk Aydın
Resistance to therapeutic agents and the highly toxic side effects of synthetic drugs has spurred new research in the treatment of colon cancer, which has high morbidity and mortality ratios. This study aims to clarify the molecular mechanisms of the anticarcinogenic properties of methanol extract of Viburnum opulus L. (EVO)and its main active compound, trans-p -coumaric acid ( p -CA), on human colon cancer cells (DLD-1, HT-29, SW-620, Caco-2) and healthy colon epithelial cells (CCD-18Co). The effects of EVO on controlled cell death (apoptosis) and the cell division cycle were determined by flow cytometry. Alteration in mRNA and protein expressions of switch genes in colorectal carcinoma (APC, MLH1, TP53, SMAD4, KRAS, and BRAF) were determined by qRT-PCR and Western blot, respectively. Our results show that EVO possesses a strong reducing capacity and free-radical scavenging activity. HPLC analyses prove that p -CAis the main compound of EVO. EVO and p -CA inhibit the proliferation of human colon cancer cells DLD-1 and HT-29 in a dose-dependent manner. EVO increases apoptosis of DLD-1 cells and halts the cell cycle in the G2 stage in HT-29 cells. mRNA and protein expressions of p53 and SMAD-4 are upregulated, while BRAFs are downregulated. The results were directly proportional to p -CA. EVO and p -CA up- and downregulate switch genes and protein expressions of DLD-1 cells, which alter the expression of 186 other genes. This is the first study of pharmacological exploration of V.opulus in human colon cancer. Its antiproliferative effects may be due to the presence of p -CA.

11 October 2019 in Journal of Biomolecular Structure and Dynamics
Verified
Journal Article
Closed access
MOMehmet Oguz
Mehmet Oguz
ABAsif Ali Bhatti
Asif Ali Bhatti
BDBerna Dogan
Berna Dogan
SKSERDAR KARAKURT
SERDAR KARAKURT
SDSerdar Durdagi
Serdar Durdagi
MYMustafa Yilmaz
Mustafa Yilmaz
Naringenin is considered as an important flavonoid in phytochemistry because of its important effect on cancer chemoprevention. Unfortunately its poor solubility has restricted its therapeutic applications. In this study, an efficient water-soluble fluorescent calix[4]arene (compound 5) was synthesized as host macromolecule to increase solubility and cytotoxicity of water-insoluble naringenin as well as to clarify localization of naringenin into the cells. Complex formed by host-guest interaction between compound 5 and naringenin was analyzed with UV-visible, fluorescence, FTIR spectroscopic techniques and molecular modeling studies . Stern-Volmer analysis showed binding constant value of Ksv 3.5 × 107 M−1 suggesting strong interaction between host and guest. Binding capacity shows 77% of naringenin was loaded on compound 5. Anticarcinogenic effects of naringenin complex were evaluated on human colorectal carcinoma cells (DLD-1) and it was found that 5-naringenin complex inhibits proliferation of DLD-1 cells 3.4-fold when compared with free naringenin. Fluorescence imaging studies show 5-naringenin complex was accumulated into the cytoplasm instead of the nucleus. Increased solubility and cytotoxicity of naringenin with fluorescent calix[4]arene makes it one of the potential candidates as a therapeutic enhancer. For deep understanding of host-guest interaction mechanisms, complementary multiscale molecular modeling analysis was also carried out.

1 October 2016 in Sensors and Actuators B: Chemical
Verified
Journal Article
Closed access
SESerkan Elçin
Serkan Elçin
HDHasalettin Deligöz
Hasalettin Deligöz
ABAsif Ali Bhatti
Asif Ali Bhatti
MOMehmet Oguz
Mehmet Oguz
SKSERDAR KARAKURT
SERDAR KARAKURT
MYMustafa Yilmaz
Mustafa Yilmaz