Ebrahim Shokoohi

Dr. Ebrahim Shokoohi

orcid

Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
27 June 2023 in Horticulturae
Verified
Journal Article
Open access
PDF file
Ebrahim ShokoohiEbrahim Shokoohi
Ebrahim Shokoohi
During a survey on soil nematode diversity, the soil samples were collected from Field-1 (3-months-not-used land), Field-2 (5-years-not-disturbed land), Field-3 (the rhizosphere of tomatoes), and Field-4 (natural land, not disturbed for 50 years), in Dalmada, Limpopo Province, South Africa. A total of 25 nematode genera were found to be associated with the surveyed plant species. The result showed Acrobeloides, Aphelenchus, Aporcella, Ditylenchus, Mesorhabditis, Pratylenchus, and Rotylenchus with a 100% frequency of occurrence. Meloidogyne was detected only in association with Field-3, with a low frequency of occurrence (25%). The study of the relationship between nematodes with physicochemical properties in the soil using Pearson correlation revealed that phosphate of the soil had a positive correlation (r = 0.977) with Bitylenchus and Pseudacrobeles species. In contrast, pH strongly correlated with Nanidorus (r = 0.928), Trypilina (r = 0.925), Xiphinema (r = 0.925), and Zeldia (r = 0.860). The principal component analysis placed Field-4 and Field-3 in two groups, indicating the biodiversity dynamics among the two locations. Soil texture showed that clay was correlated with Rotylenchulus. In contrast, soil texture had no effect on Meloidogyne. The Shannon index was the lowest (1.7) for Field-1 in Dalmada compared to the other Fields, indicating lower nematode diversity. The structure index showed that Field-2 was disturbed with a low C:N ratio. In contrast, Field-3 and Field-4 had suppressive soil but matured and fertile. The network analysis showed that Panagrolaimus was only found in Field-4 and was the most engaging genus describing soil quality in the soil system in Dalmada. In conclusion, Field-2 showed a high diversity of free-living nematodes than the disturbed land of tomatoes. Additionally, plant-parasitic nematodes numbered more in the rhizosphere of tomatoes. The results suggest that the soil nematodes, especially free-living bacterivores, may mediate the effects of ecosystem disturbance on soil health.

1 March 2018 in Zootaxa
Verified
Journal Article
Closed access
PDF file
Ebrahim ShokoohiEbrahim Shokoohi
Ebrahim Shokoohi
MMMariette Marais
Mariette Marais
HFHendrika Fourie
Hendrika Fourie
HPHadi Panahi
Hadi Panahi
Three Helicotylenchus species, namely Helicotylenchus digonicus, Helicotylenchus pseudorobustus and Helicotylenchus vulgaris were identified during a nematode survey conducted in Iran. The morphological and molecular characteristics of the species were defined. In addition, phylogenetic analysis of five Iranian Helicotylenchus populations based on 28S rDNA were done and showed the unresolved position of molecularly identified H. pseudorobustus and H. digonicus. However, populations of H. vulgaris and H. digonicus were placed close to each other. Phylogenetic analysis confirmed that molecularly characterized Helicotylenchus species formed a monophyletic clade. A detailed revision of the species is, however, needed. Illustrations and measurements for all species are provided.

12 November 2020 in Zootaxa
Verified
Journal Article
Closed access
PDF file
ARAasha Rana
Aasha Rana
ABAashaq Hussain Bhat
Aashaq Hussain Bhat
ACASHOK KUMAR CHAUBEY
ASHOK KUMAR CHAUBEY
Ebrahim ShokoohiEbrahim Shokoohi
Ebrahim Shokoohi
RMRicardo A. R. Machado
Ricardo A. R. Machado
Agricultural soils and open fields from Western Uttar Pradesh (India) were surveyed to determine the presence of entomopathogenic nematodes. From the entomopathogenic nematodes isolated, Heterorhabditis isolates were selected and further characterized using morphological, morphometrical and molecular approaches. The results showed that three isolated nematodes were Heterorhabditis bacteriophora and were associated with Photorhabdus laumondii subsp. clarkei bacteria, while the rests were identified as Heterorhabditis indica. The biocontrol potential of H. bacteriophora against three agricultural pests was evaluated. Nematode infectivity experiments showed that the nematode isolates DH7 and DH8 were highly pathogenic against cotton bollworm (Helicoverpa armigera) and tobacco cutworm (Spodoptera litura), and less pathogenic against white grub (Holotrichia serrata) larvae. This study sets the basis for establishing new biocontrol agents to be used in pest management programs in India.

22 September 2021 in International Microbiology
Verified
Journal Article
Closed access
PDF file
Ebrahim ShokoohiEbrahim Shokoohi
Ebrahim Shokoohi
PMPhatu William Mashela
Phatu William Mashela
RMRicardo A. R. Machado
Ricardo A. R. Machado

3 September 2022 in Helminthologia
Verified
Journal Article
Open access
PDF file
Ebrahim ShokoohiEbrahim Shokoohi
Ebrahim Shokoohi
Summary: Hemicriconemoides brachyurus was identified morphologically, using body annuli number (103105), stylet length (49-52 μm), tail conical with small rounded lobe, spermatheca with round sperm, and VL/VB (1.3). Molecular analysis was also undertaken, based on the 18S rDNA region, and the obtained DNA sequence data confirmed the present population from South Africa as Hemicriconemoides. Phylogenetic analysis using the Bayesian inference method places this population close to H. fujianensis from China (MH444620-21; MH444626-28). To the best of our knowledge, this is the first report of the 18S rDNA sequence for H. brachyurus.

28 March 2024 in Horticulturae
Verified
Journal Article
Open access
PDF file
Ebrahim ShokoohiEbrahim Shokoohi
Ebrahim Shokoohi
PMPeter Masoko
Peter Masoko
Turfloop constitutes an area in Mankweng, situated in the Limpopo Province of South Africa, where several villages are home to smallholder farmers who specialize in vegetable farming. Among the most crucial crops cultivated in this region is tomato, a fruit that has gained significant commercial importance due to its high demand and versatility in various culinary applications. To determine the relationship of plant-parasitic nematodes and soil physicochemical properties, soil samples were collected from tomato fields. Overall, our results showed that seven nematode genera were in the tomato fields. There was a significant positive correlation between the number of Meloidogyne and potassium (r = 0.903) and a negative correlation with Na (r = −0.684). In contrast, there was no association between the number of Meloidogyne spp. and the pH and texture of the fields. The number of Criconema in the field was negatively correlated with pH (r = −0.732). Soil texture percentages, including clay (r = 0.744), sand (r = −0.744), and silt (r = 0.706), were only correlated with the number of Criconema. The number of dagger nematodes, Xiphinema, was only correlated negatively with NH4+ (r = −0.589) and positively with boron (B) (r = 0.779). None of the soil variables were correlated with the number of Pratylenchus. The principal component analysis (PCA) placed soil samples of tomatoes together, in which the number of Meloidogyne was not correlated to any soil sample site. In conclusion, plant-parasitic nematodes that were associated with tomatoes are of high economic importance as they can reduce the yield. Criconema was found to be sensitive to the soil’s physicochemical properties. In addition, Helicotylenchus was found in all soil samples. Our results suggest that the plant-parasitic nematodes in tomatoes have high diversity with the potential to reduce crop production.