Wajya Ajmal

Ms. Wajya Ajmal

orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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27 August 2022 in Genes
Verified
Journal Article
Open access
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FMFatima Muccee
Fatima Muccee
SGShakira Ghazanfar
Shakira Ghazanfar
WAWajya Ajmal
Wajya Ajmal
MAMajid Al-Zahrani
Majid Al-Zahrani
Estrogen circulating in blood has been proved to be a strong biomarker for breast cancer. A β-glucuronidase enzyme (GUS) from human gastrointestinal tract (GIT) microbiota including probiotics has significant involvement in enhancing the estrogen concentration in blood through deconjugation of glucuronidated estrogens. The present project has been designed to explore GIT microbiome-encoded GUS enzymes (GUSOME) repertoire in normal human and breast cancer patients. For this purpose, a total of nineteen GUS enzymes from human GIT microbes, i.e., seven from healthy and twelve from breast cancer patients have been focused on. Protein sequences of enzymes retrieved from UniProt database were subjected to ProtParam, CELLO2GO, SOPMA (secondary structure prediction method), PDBsum (Protein Database summaries), PHYRE2 (Protein Homology/AnalogY Recognition Engine), SAVES v6.0 (Structure Validation Server), MEME version 5.4.1 (Multiple Em for Motif Elicitation), Caver Web server v 1.1, Interproscan and Predicted Antigenic Peptides tool. Analysis revealed the number of amino acids, isoelectric point, extinction coefficient, instability index and aliphatic index of GUS enzymes in the range of 586–795, 4.91–8.92, 89,980–155,075, 25.88–40.93 and 71.01–88.10, respectively. Sub-cellular localization of enzyme was restricted to cytoplasm and inner-membrane in case of breast cancer patients’ bacteria as compared to periplasmic space, outer membrane and extracellular space in normal GIT bacteria. The 2-D structure analysis showed α helix, extended strand, β turn and random coil in the range of 27.42–22.66%, 22.04–25.91%, 5.39–8.30% and 41.75–47.70%, respectively. The druggability score was found to be 0.05–0.45 and 0.06–0.80 in normal and breast cancer patients GIT, respectively. The radius, length and curvature of catalytic sites were observed to be 1.1–2.8 Å, 1.4–15.9 Å and 0.65–1.4, respectively. Ten conserved protein motifs with p < 0.05 and width 25–50 were found. Antigenic propensity-associated sequences were 20–29. Present study findings hint about the use of the bacterial GUS enzymes against breast cancer tumors after modifications via site-directed mutagenesis of catalytic sites involved in the activation of estrogens and through destabilization of these enzymes.

1 December 2014 in Molecular Phylogenetics and Evolution
Verified
Journal Article
Closed access
WAWajya Ajmal
Wajya Ajmal
HKHiba Khan
Hiba Khan
AAAmir Ali Abbasi
Amir Ali Abbasi

1 April 2024
Verified
Book Chapter
Closed access
PDF file
Shakira GhazanfarShakira Ghazanfar
Shakira Ghazanfar
RARameesha Abid
Rameesha Abid
WAWajya Ajmal
Wajya Ajmal
ZHZulqarnain Haider
Zulqarnain Haider
BKBushra Khan
Bushra Khan
SJS.U. Jyoti
S.U. Jyoti
In order to sustain life and promote good health, it is essential to have access to adequate quantities of safe and healthy foods. Globally, food contamination affects over 600 million individuals and kills almost 420,000 people annually. Food safety is a scientific approach that describes how to handle, prepare, and store food judiciously to reduce the risk of food-borne illness. Numerous contaminants pose a serious threat to food safety, and these include physical, chemical, and biological contaminants. Risk assessment deals with scientific analysis of known or probable adverse health consequences brought on by human exposure to food-borne risks, according to Codex Alimentarius. It offers a neutral scientific foundation for decision-making to guarantee the safety of the food supply. Methods of risk assessment and management to validate food safety can be improved by establishing standard protocols and policies for food traded nationally and internationally. This chapter highlights how risk assessment can be used to identify significant knowledge gaps. Characterization of the most significant risk factors in food production systems and implementation of risk reduction strategies to establish and secure human health are discussed. Additionally, various steps leading to food safety have been discussed in detail. <!----> <!----> <!----> <!---->

30 March 2022
Verified
Preprint
Open access
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WAWajya Ajmal
Wajya Ajmal
AMAqsa Majeed
Aqsa Majeed
MKMuhammad Khan
Muhammad Khan
Maize (Zea mays L.) holds significance importance in Pakistan in addition to being the highest yielding cereal crop in the world. But its yield has been severely affected due to the different environmental constraints including heat stress. In order to meet the growing food demand there is dire need to produce climate resilient varieties of maize. For this purpose we need to exploit the biochemical and molecular mechanisms involved in providing heat resistance to maize. In present study four genes were selected which were reportedly involved in response against heat stimulus, but were not structurally and functionally characterized. Therefore in-silico approach was used in order to investigate these hypothetical/candidate proteins. The phylogenetic investigation was conducted to find the evolutionary relationship. The 3D structures were elucidated in addition to the secondary structure prediction. Conserved domains and their interactions with other proteins were analyzed for the functional annotation. Our results showed that the protein sequences of maize are showing constant evolutionary change similar to their homologues. Predicted structures and domains of HPs are involved in conferring heat tolerance to maize crop. NP_001148903.1 is one of the HP; its interactions with other proteins along with its predicted domains, suggests that it is involved in stress response as most of its interacting partners are stress responsive proteins. This theoretical overview of heat tolerance proteins in maize will help researchers in understanding their predicted structure and function which will aide them in designing the genetically engineered varieties of heat resilient maize.