Michał Badocha

Mr. Michał Badocha


Research Focus & Metrics

Academic Career Length

12Years (2015-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 September 2018 in Interactive CardioVascular and Thoracic Surgery
Verified
Journal Article
Closed access
TMTomasz Marjanski
Tomasz Marjanski
MBMichał Badocha
Michał Badocha
DWDamian Wnuk
Damian Wnuk
RDRobert Dziedzic
Robert Dziedzic
MOMarcin Ostrowski
Marcin Ostrowski
WRWitold Rzyman
Witold Rzyman
Pathological tumour, node and metastasis (TNM) stage remains the most significant prognostic factor of non-small-cell lung cancer (NSCLC). Meanwhile, age, gender, pulmonary function tests, the extent of surgical resection and the presence of concomitant diseases are commonly used to complete the prognostic profile of the patient with early stage of NSCLC. The aim of this study is to assess how the result of a 6-min walk test (6MWT) further assists in predicting the prognosis of NSCLC surgical candidates. Six hundred and twenty-four patients who underwent surgical treatment for NSCLC between April 2009 and October 2011 were enrolled in this study. All patients were accepted for surgery on the basis of a standard evaluation protocol. Additionally, patients completed the 6MWT on the day before the surgery, and threshold values of the test were assessed based on both the Akaike information criterion and the coefficient of determination R2. Cox proportional hazards regression analysis was used to analyse the effect of important prognostic factors on the overall survival. Three hundred and ninety men and 234 women with a mean age of 64 years underwent radical surgical treatment for primary lung cancer. Five hundred and twenty-five lobectomies (84%), 77 pneumonectomies (12%) and 24 (4%) lesser resections were performed. Three hundred and thirty-one patients (53%) were treated for stage I NSCLC, 191 patients (31%) for stage II and 102 patients (16%) for stages IIIA-IV. A distance of 525 m in the 6MWT [hazard ratio (HR) = 0.57, 95% confidence interval (CI) 0.41-0.78, P < 0.001] was the threshold value differentiating the patients' prognoses (P < 0.001). Using the Cox proportional hazards regression analysis, pathological TNM stage (IIA: HR = 1.87, 95% CI 1.95-2.92, P = 0.006; IIB: HR = 2.03, 95% CI 1.23-3.37, P = 0.006; IIIA-IV: HR = 2.37, 95% CI 1.49-3.75, P < 0.001), male gender (HR = 1.88, 95% CI 1.26-2.79, P = 0.001), pneumonectomy (HR = 1.78, 95% CI 1.17-2.70, P < 0.001) and the results of the 6MWT (HR = 0.50, 95% CI 0.36-0.70, P < 0.001) were considered as independent predictive factors of overall survival. The result of a 6MWT is an independent and convenient prognostic factor of surgically treated non-small-cell lung cancer.

1 July 2021 in CATENA
Verified
Journal Article
Closed access
HKHalina Kaczmarek
Halina Kaczmarek
ABArkadiusz Bartczak
Arkadiusz Bartczak
STSebastian Tyszkowski
Sebastian Tyszkowski
MBMichał Badocha
Michał Badocha
MKMichał Krzemiński
Michał Krzemiński

11 June 2019 in BMC Cancer
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Journal Article
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Maciej StukanMaciej Stukan
Maciej Stukan
MBMichał Badocha
Michał Badocha
KRKarol Ratajczak
Karol Ratajczak
Pre-operative discrimination of malignant from benign adnexal masses is crucial for planning additional imaging, preparation, surgery and postoperative care. This study aimed to define key ultrasound and clinical variables and develop a predictive model for calculating preoperative ovarian tumor malignancy risk in a gynecologic oncology referral center. We compared our model to a subjective ultrasound assessment (SUA) method and previously described models. This prospective, single-center observational study included consecutive patients. We collected systematic ultrasound and clinical data, including cancer antigen 125, D-dimer (DD) levels and platelet count. Histological examinations served as the reference standard. We performed univariate and multivariate regressions, and Bayesian information criterion (BIC) to assess the optimal model. Data were split into 2 subsets: training, for model development (190 observations) and testing, for model validation (n = 100). Among 290 patients, 52% had malignant disease, including epithelial ovarian cancer (72.8%), metastatic disease (14.5%), borderline tumors (6.6%), and non-epithelial malignancies (4.6%). Significant variables were included into a multivariate analysis. The optimal model, included three independent factors: solid areas, the color score, and the DD level. Malignant and benign lesions had mean DD values of 2.837 and 0.354 μg/ml, respectively. We transformed established formulae into a web-based calculator ( http://gin-onc-calculators.com/gynonc.php ) for calculating the adnexal mass malignancy risk. The areas under the curve (AUCs) for models compared in the testing set were: our model (0.977), Simple Rules risk calculation (0.976), Assessment of Different NEoplasias in the adneXa (ADNEX) (0.972), Logistic Regression 2 (LR2) (0.969), Risk of Malignancy Index (RMI) 4 (0.932), SUA (0.930), and RMI3 (0.912). Two simple ultrasound predictors and the DD level (also included in a mathematical model), when used by gynecologist oncologist, discriminated malignant from benign ovarian lesions as well or better than other more complex models and the SUA method. These parameters (and the model) may be clinically useful for planning adequate management in the cancer center. The model needs substantial validation.

18 September 2017 in Positivity
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Journal Article
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MBMichał Badocha
Michał Badocha
WBWojciech Bartoszek
Wojciech Bartoszek
We study the convergence of iterates of quadratic stochastic operators that are mean monotonic. They are defined on the convex set of probability measures concentrated on a weakly compact order interval \(S = [0, f]\) of a fixed Banach lattice F. We study their regularity and identify the limits of trajectories either as the “infimum” or “supremum” of the support of initial distributions.

13 February 2023 in Proceedings of the National Academy of Sciences
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Journal Article
Open access
MBMichał Badocha
Michał Badocha
MWMiłosz Wieczór
Miłosz Wieczór
AMAntoni Marciniak
Antoni Marciniak
CKCyprian Kleist
Cyprian Kleist
HGHelmut Grubmüller
Helmut Grubmüller
JCJacek Czub
Jacek Czub
F 1 -ATPase is a motor protein that couples the rotation of its rotary γ subunit with ATP synthesis or hydrolysis. Single-molecule experiments indicate that nucleotide binding and release events occur almost simultaneously during the synthesis cycle, allowing the energy gain due to spontaneous binding of ADP to one catalytic β subunit to be directly harnessed for driving the release of ATP from another rather than being dissipated as heat. Here, we examine the unknown mechanism of this coupling that is critical for an exceptionally high mechanochemical efficiency of F 1 -ATPase by means of all-atom free-energy simulations. We find that nondissipative and kinetically fast progression of the motor in the synthesis direction requires a concerted conformational change involving the closure of the ADP-binding β subunit followed by the gradual opening of the ATP-releasing β subunit over the course of the 30 to 40° rotary substep of the γ subunit. This rotary substep, preceding the ATP-dependent metastable state, allows for the recovery of a large portion of the ADP binding energy in the conformation of ATP-bound β that gradually adopts the low-affinity conformation, captured also by the recent cryo-EM structure of this elusive state. The release of ATP from this nearly open conformation leads to its further opening, which enables the progression of the motor to the next catalytic metastable state. Our simulations explain this energy conversion mechanism in terms of intersubunit and ligand–protein interactions.

16 March 2015 in Annals of Oncology
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Journal Article
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TMTomasz Marjanski
Tomasz Marjanski
MBMichał Badocha
Michał Badocha
DWDamian Wnuk
Damian Wnuk
AMA. Mosiewicz
A. Mosiewicz
WRWitold Rzyman
Witold Rzyman
Aim: Pathological TNM (pTNM) remains the most significant prognostic factor of non-small cell lung cancer (NSCLC). Age, gender, pulmonary function tests, the extent of surgical resection and presence of concomitant diseases are commonly used to complete the profile of the patient with early stage of NSCLC. The aim of the study was to assess the influence of the result of 6-minute walk test (6MWT) on the prognosis of patients with surgically treated NSCLC.