We develop a novel sampling theorem on the sphere and corresponding fast algorithms by associating the sphere with the torus through a periodic extension. The fundamental property of any sampling theorem is the number of samples required to represent a band-limited signal. To represent exactly a signal on the sphere band-limited at L, all sampling theorems on the sphere require O(L2) samples. However, our sampling theorem requires less than half the number of samples of other equiangular sampling theorems on the sphere and an asymptotically identical, but smaller, number of samples than the Gauss-Legendre sampling theorem. The complexity of our algorithms scale as O(L3), however, the continual use of fast Fourier transforms reduces the constant prefactor associated with the asymptotic scaling considerably, resulting in algorithms that are fast. Furthermore, we do not require any precomputation and our algorithms apply to both scalar and spin functions on the sphere without any change in computational complexity or computation time. We make our implementation of these algorithms available publicly and perform numerical experiments demonstrating their speed and accuracy up to very high band-limits. Finally, we highlight the advantages of our sampling theorem in the context of potential applications, notably in the field of compressive sampling.
1 October 2012 in Monthly Notices of the Royal Astronomical Society
Validation is arguably the bottleneck in the diffusion magnetic resonance imaging (MRI) community. This paper evaluates and compares 20 algorithms for recovering the local intra-voxel fiber structure from diffusion MRI data and is based on the results of the “HARDI reconstruction challenge” organized in the context of the “ISBI 2012” conference. Evaluated methods encompass a mixture of classical techniques well known in the literature such as diffusion tensor, Q-Ball and diffusion spectrum imaging, algorithms inspired by the recent theory of compressed sensing and also brand new approaches proposed for the first time at this contest. To quantitatively compare the methods under controlled conditions, two datasets with known ground-truth were synthetically generated and two main criteria were used to evaluate the quality of the reconstructions in every voxel: correct assessment of the number of fiber populations and angular accuracy in their orientation. This comparative study investigates the behavior of every algorithm with varying experimental conditions and highlights strengths and weaknesses of each approach. This information can be useful not only for enhancing current algorithms and develop the next generation of reconstruction methods, but also to assist physicians in the choice of the most adequate technique for their studies.
Incoherence between sparsity basis and sensing basis is an essential concept for compressive sampling. In this context, we advocate a coherence-driven optimization procedure for variable density sampling. The associated minimization problem is solved by use of convex optimization algorithms. We also propose a refinement of our technique when prior information is available on the signal support in the sparsity basis. The effectiveness of the method is confirmed by numerical experiments. Our results also provide a theoretical underpinning to state-of-the-art variable density Fourier sampling procedures used in MRI.
1 January 2014 in SIAM Journal on Imaging Sciences
Inspired by the recently proposed magnetic resonance fingerprinting (MRF) technique, we develop a principled compressed sensing framework for quantitative MRI. The three key components are a random pulse excitation sequence following the MRF technique, a random EPI subsampling strategy, and an iterative projection algorithm that imposes consistency with the Bloch equations. We show that, theoretically, as long as the excitation sequence possesses an appropriate form of persistent excitation, we are able to accurately recover the proton density, T1, T2, and off-resonance maps simultaneously from a limited number of samples. These results are further supported through extensive simulations using a brain phantom.