Stacy D Singer

Dr. Stacy D Singer

Lethbridge Research and Development Centre, Agriculture and Agri-Food Canada, 5403 1st Avenue South, Lethbridge, AB T1J 4B1, Canada

Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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8 April 2020 in Plants
Verified
Journal Article
Open access
PDF file
JLJunhao Lu
Junhao Lu
YXYang Xu
Yang Xu
JWJuli Wang
Juli Wang
Stacy D SingerStacy D Singer
Stacy D Singer
GCGuanqun(Gavin) Chen
Guanqun(Gavin) Chen
Vegetable oil is mainly composed of triacylglycerol (TAG), a storage lipid that serves as a major commodity for food and industrial purposes, as well as an alternative biofuel source. While TAG is typically not produced at significant levels in vegetative tissues, emerging evidence suggests that its accumulation in such tissues may provide one mechanism by which plants cope with abiotic stress. Different types of abiotic stress induce lipid remodeling through the action of specific lipases, which results in various alterations in membrane lipid composition. This response induces the formation of toxic lipid intermediates that cause membrane damage or cell death. However, increased levels of TAG under stress conditions are believed to function, at least in part, as a means of sequestering these toxic lipid intermediates. Moreover, the lipid droplets (LDs) in which TAG is enclosed also function as a subcellular factory to provide binding sites and substrates for the biosynthesis of bioactive compounds that protect against insects and fungi. Though our knowledge concerning the role of TAG in stress tolerance is expanding, many gaps in our understanding of the mechanisms driving these processes are still evident. In this review, we highlight progress that has been made to decipher the role of TAG in plant stress response, and we discuss possible ways in which this information could be utilized to improve crops in the future.

2 January 2021 in Critical Reviews in Plant Sciences
Verified
Journal Article
Open access
Stacy D SingerStacy D Singer
Stacy D Singer
JLJohn Laurie
John Laurie
ABAndriy Bilichak
Andriy Bilichak
SKSantosh Kumar
Santosh Kumar
JSJaswinder Singh
Jaswinder Singh
For thousands of years, humans have been improving crops to better suit their needs. These enhancements are driven by changes in the genetic makeup of the plant. While this was initially unintentional, there has been a steady push to increase the pace and precision of crop breeding, something that has occurred alongside a growing understanding of genetics and an escalating capacity to thoroughly assess genomes at the molecular level. With the advent and rapid uptake of molecular breeding techniques, such as transgenics and genome editing over the past few decades, there has been much trepidation regarding the possibility of off-target effects derived from unanticipated mutations at loci other than those intended for alteration, and the unintended risks that this might confer. These concerns persist regardless of the fact that a growing number of studies indicate that the occurrence of off-target mutations derived from newer biotechnological breeding techniques are negligible compared to what is observed with many conventional breeding approaches, and even spontaneously from one generation to the next. Given the impending food security crisis that we are facing in the short-term, there is a critical need to implement a wide range of breeding tools as a means of meeting growing demand, withstanding climate change-related pressures, increasing nutrition, and providing environmental benefits. While food safety is clearly of the utmost importance, now is certainly not the time to prevent the use of particular breeding technologies based on unfounded doubts. Therefore, in this review, we attempt to shed light on these apprehensions by putting purported “risks” into the context of plant breeding as a whole by comparing frequencies of spontaneous mutations with those (both anticipated and unanticipated) that occur through various conventional and biotechnological breeding approaches, including transgenics and genome editing. We then consider how these changes may, or may not, translate into unanticipated risk, and discuss the current global regulatory asynchrony surrounding genome edited crops.

10 November 2017 in Plant, Cell & Environment
Verified
Journal Article
Closed access
PDF file
Stacy D SingerStacy D Singer
Stacy D Singer
Abdelali HannoufaAbdelali Hannoufa
Abdelali Hannoufa
SASurya Acharya
Surya Acharya

27 August 2020 in Lipids
Verified
Journal Article
Closed access
PDF file
USUdaya Subedi
Udaya Subedi
KJKethmi N. Jayawardhane
Kethmi N. Jayawardhane
XPXue Pan
Xue Pan
JOJocelyn Ozga
Jocelyn Ozga
GCGuanqun(Gavin) Chen
Guanqun(Gavin) Chen
Stacy D SingerStacy D Singer
Stacy D Singer

20 February 2013 in The Plant Journal
Verified
Journal Article
Open access
PDF file
GCGuanqun(Gavin) Chen
Guanqun(Gavin) Chen
WDWei Deng
Wei Deng
FPFred Peng
Fred Peng
MTMartin Truksa
Martin Truksa
Stacy D SingerStacy D Singer
Stacy D Singer
RWRandall J. Weselake
Randall J. Weselake
Summary: The transcription factor TRANSPARENT TESTA 16 (TT16) plays an important role in endothelial cell specification and proanthocyanidin (PA) accumulation. However, its precise regulatory function with regard to the expression of endothelial‐associated genes in developing seeds, and especially in the PA‐producing inner integument, remains largely unknown. Therefore, we endeavored to characterize four TT16 homologs from the allotetraploid oil crop species Brassica napus, and systematically explore their regulatory function in endothelial development. Our results indicated that all four BnTT16 genes were predominantly expressed in the early stages of seed development, but at distinct levels, and encoded functional proteins. Bntt16 RNA interference lines exhibited abnormal endothelial development and decreased PA content, while PA polymerization was not affected. In addition to the previously reported function of TT16 in the transcriptional regulation of anthocyanidin reductase (ANR) and dihydroflavonol reductase (TT3), we also determined that BnTT16 proteins played a significant role in the transcriptional regulation of five other genes involved in the PA biosynthetic pathway (P < 0.01). Moreover, we identified two genes involved in inner integument development that were strongly regulated by the BnTT16 proteins (TT2 and δ‐vacuolar processing enzyme). These results will better our understanding of the precise role of TT16 in endothelial development in Brassicaceae species, and could potentially be used for the future improvement of oilseed crops.

5 January 2022 in Frontiers in Plant Science
Verified
Journal Article
Open access
Stacy D SingerStacy D Singer
Stacy D Singer
KHKimberley Burton Hughes
Kimberley Burton Hughes
USUdaya Subedi
Udaya Subedi
GDGaganpreet Kaur Dhariwal
Gaganpreet Kaur Dhariwal
KKKazi Kader
Kazi Kader
AHAbdelali Hannoufa
Abdelali Hannoufa
Alfalfa (Medicago sativa L.) is the most widely grown perennial leguminous forage and is an essential component of the livestock industry. Previously, the RNAi-mediated down-regulation of alfalfa SQUAMOSA PROMOTER-BINDING PROTEIN-LIKE 8 (MsSPL8) was found to lead to increased branching, regrowth and biomass, as well as enhanced drought tolerance. In this study, we aimed to further characterize the function of MsSPL8 in alfalfa using CRISPR/Cas9-induced mutations in this gene. We successfully generated alfalfa genotypes with small insertions/deletions (indels) at the target site in up to three of four MsSPL8 alleles in the first generation. The efficiency of editing appeared to be tightly linked to the particular gRNA used. The resulting genotypes displayed consistent morphological alterations, even with the presence of up to two wild-type MsSPL8 alleles, including reduced leaf size and early flowering. Other phenotypic effects appeared to be dependent upon mutational dosage, with those plants with the highest number of mutated MsSPL8 alleles also exhibiting significant decreases in internode length, plant height, shoot and root biomass, and root length. Furthermore, MsSPL8 mutants displayed improvements in their ability to withstand water-deficit compared to empty vector control genotypes. Taken together, our findings suggest that allelic mutational dosage can elicit phenotypic gradients in alfalfa, and discrepancies may exist in terms of MsSPL8 function between alfalfa genotypes, growth conditions, or specific alleles. In addition, our results provide the foundation for further research exploring drought tolerance mechanisms in a forage crop.