Kohei Funasaka

Dr. Kohei Funasaka

orcid

Research Focus & Metrics

Academic Career Length

17Years (2010-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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15 October 2011 in Molecular Biology of the Cell
Verified
Journal Article
Open access
MMMasao Maeda
Masao Maeda
HHHitoki Hasegawa
Hitoki Hasegawa
THToshinori Hyodo
Toshinori Hyodo
SISatoko Ito
Satoko Ito
EAEri Asano
Eri Asano
TSTakeshi Senga
Takeshi Senga
Rho GTPases are molecular switches that transmit biochemical signals in response to extracellular stimuli to elicit changes in the actin cytoskeleton. Rho GTPases cycle between an active, GTP-bound state and an inactive, GDP-bound state. These states are regulated by two distinct families of proteins—guanine nucleotide exchange factors and GTPase-activating proteins (GAPs). We studied the role of a previously uncharacterized GAP, ARHGAP18 (MacGAP). Overexpression of ARHGAP18 suppressed the activity of RhoA and disrupted stress fiber formation. Conversely, silencing of ARHGAP18 by small interfering RNA transfection–enhanced stress fiber formation and induced rounding of cells. We examined the role of ARHGAP18 in cell spreading and migration. Immunofluorescence analysis revealed that ARHGAP18 was localized to the leading edge during cell spreading and migration. ARHGAP18-knockdown cells showed impaired spreading, premature formation of stress fibers, and sustained activation of RhoA upon cell attachment. In addition, knockdown and overexpression of ARHGAP18 resulted in the inhibition and promotion of cell migration, respectively. Furthermore, ARHGAP18 was required for the polarization of cells for migration. Our results define ARHGAP18 as one of the crucial factors for the regulation of RhoA for the control of cell shape, spreading, and migration.

11 March 2013 in BMC Infectious Diseases
Verified
Journal Article
Open access
PDF file
NLNing Liu
Ning Liu
TATakafumi Ando
Takafumi Ando
KIKazuhiro Ishiguro
Kazuhiro Ishiguro
OMOsamu Maeda
Osamu Maeda
OWOsamu Watanabe
Osamu Watanabe
HGHidemi Goto
Hidemi Goto
Background: The distal esophagus harbors a complex bacterial population. We hypothesized that a better understanding of bacterial communities in the esophagus would facilitate understanding of the role of bacteria in esophageal disease. Here, we investigated bacterial composition in the distal esophagus in subjects with a normal esophagus, reflux esophagitis, and Barrett’s esophagus. Methods: Two biopsy specimens were obtained from the distal esophagus at 1 cm above the gastroesophageal junction under endoscopic examination in 18 patients (6 each with normal esophagus, reflux esophagitis, and Barrett’s esophagus) and used for histological examination and DNA extraction. Fragments of 16S rDNA genes were amplified by PCR using general bacterial primers, and bacterial populations were examined. A third biopsy specimen was taken from the patients with Barrett’s esophagus to histologically confirm the replacement of squamous epithelium with columnar epithelium in the distal esophagus. Results: Endoscopic diagnoses of normal esophagus, esophagitis, and Barrett’s esophagus were confirmed by histological findings. The total amount of bacterial DNA detected did not significantly differ among groups (p > 0.1). On average, each of the 18 subjects yielded about 350 clones, of which 40 were randomly picked and sequenced. Analysis of 147 16S rDNA sequences from 240 clones of 6 subjects with normal esophagus yielded four phyla, Proteobacteria (49%), Firmicutes (40%), Bacteroidetes (8%), and Actinobacteria (3%). Similar analysis of 139 16S rDNA sequences from 240 clones of 6 patients with reflux esophagitis yielded 6 phyla, Proteobacteria (43%), Firmicutes (33%), Bacteroidetes (10%), Fusobacteria (10%), Actinobacteria (2%), and TM7 (2%). while that of 138 16S rDNA sequences from 240 clones of 6 cases of Barrett’s esophagus yielded 5 phyla, Firmicutes (55%), Proteobacteria (20%), Bacteroidetes (14%), Fusobacteria (9%), and Actinobacteria (2%). Thus, microbial communities differed among patients with a normal esophagus, reflux esophagitis and Barrett’s esophagus. Conclusions: Esophageal bacterial composition differs under conditions of normal esophagus, reflux esophagitis, and Barrett’s esophagus. Diverse bacterial communities may be associated with esophageal disease.

1 August 2016 in Gastrointestinal Endoscopy
Verified
Journal Article
Closed access
TMTomomasa Morishima
Tomomasa Morishima
HKHiroki Kawashima
Hiroki Kawashima
EOEizaburo Ohno
Eizaburo Ohno
TYTakeshi Yamamura
Takeshi Yamamura
KFKohei Funasaka
Kohei Funasaka
YHYoshiki Hirooka
Yoshiki Hirooka

12 September 2013 in Journal of Gastroenterology
Verified
Journal Article
Closed access
PDF file
YIYuya Itoh
Yuya Itoh
AIAkihiro Itoh
Akihiro Itoh
HKHiroki Kawashima
Hiroki Kawashima
EOEizaburo Ohno
Eizaburo Ohno
YNYosuke Nakamura
Yosuke Nakamura
YHYoshiki Hirooka
Yoshiki Hirooka

25 September 2012 in Journal of Gastroenterology
Verified
Journal Article
Closed access
PDF file
YHYoshiki Hirooka
Yoshiki Hirooka
AIAkihiro Itoh
Akihiro Itoh
HKHiroki Kawashima
Hiroki Kawashima
EOEizaburo Ohno
Eizaburo Ohno
YIYuya Itoh
Yuya Itoh
HGHidemi Goto
Hidemi Goto

19 December 2016 in Journal of Gastroenterology
Verified
Journal Article
Closed access
PDF file
TKTakamichi Kuwahara
Takamichi Kuwahara
YHYoshiki Hirooka
Yoshiki Hirooka
HKHiroki Kawashima
Hiroki Kawashima
EOEizaburo Ohno
Eizaburo Ohno
TITakuya Ishikawa
Takuya Ishikawa
HGHidemi Goto
Hidemi Goto