Philippe Dague

Prof. Philippe Dague

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Research Focus & Metrics

Academic Career Length

19Years (2008-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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21 February 2017 in PLOS ONE
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Journal Article
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Sabine PeresSabine Peres
Sabine Peres
MJMario Jolicœur
Mario Jolicœur
CMCécile Moulin
Cécile Moulin
PDPhilippe Dague
Philippe Dague
SSStefan Schuster
Stefan Schuster
We present a method for computing thermodynamically feasible elementary flux modes (tEFMs) using equilibrium constants without need of internal metabolite concentrations. The method is compared with the method based on a binary distinction between reversible and irreversible reactions. When all reactions are reversible, adding the constraints based on equilibrium constants reduces the number of elementary flux modes (EFMs) by a factor of two. Declaring in advance some reactions as irreversible, based on reliable biochemical expertise, can in general reduce the number of EFMs by a greater factor. But, even in this case, computing tEFMs can rule out some EFMs which are biochemically irrelevant. We applied our method to two published models described with binary distinction: the monosaccharide metabolism and the central carbon metabolism of Chinese hamster ovary cells. The results show that the binary distinction is in good agreement with biochemical observations. Moreover, the suppression of the EFMs that are not consistent with the equilibrium constants appears to be biologically relevant.

19 January 2017 in International Journal of Control, Automation, and Systems
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IGImen Gueddi
Imen Gueddi
ONOthman Nasri
Othman Nasri
KBKamal Benothman
Kamal Benothman
PDPhilippe Dague
Philippe Dague

30 July 2016
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Book Chapter
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NFNouioua Farid
Nouioua Farid
PDPhilippe Dague
Philippe Dague
LYLina Ye
Lina Ye

9 March 2018
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Book Chapter
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HZHadi Zaatiti
Hadi Zaatiti
LYLina Ye
Lina Ye
PDPhilippe Dague
Philippe Dague
JGJean-Pierre Gallois
Jean-Pierre Gallois
LTLouise Travé-Massuyès
Louise Travé-Massuyès

1 December 2015
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Book Chapter
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LYLina Ye
Lina Ye
PDPhilippe Dague
Philippe Dague
FNFarid Nouioua
Farid Nouioua

18 November 2019 in Innovations in Systems and Software Engineering
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Journal Article
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PDPhilippe Dague
Philippe Dague
LHLulu He
Lulu He
LYLina Ye
Lina Ye