The conventional technique for controlling the states of individual qubits and quantum registers is based on the use of high-frequency modulated pulses whose carrier frequency is close to the transition frequency between the ground states of “artificial atoms” and “molecules” (the Rabi technique). In this paper, an alternative concept for controlling superconducting qubits is developed that is based on the idea of fast excitation of a quantum system by solitary unmodulated pulses. The formation of entangled Bell states in a two-qubit superconducting register under the action of field pulses obtained by rapid single flux quantum (RSFQ) devices is demonstrated by numerical simulation. The tomography of quantum states is performed by solving the density matrix equation. It is shown that the technique of “unipolar pulses” allows one to speed up the formation of entangled states (at picosecond times) with a fidelity of 95–98%. The execution of the basic quantum algorithms is demonstrated: the Deutsch–Jozsa algorithm with an accuracy of more than 98% and Grover’s algorithm with an accuracy of 93%.