Somnath K Holkar

Dr. Somnath K Holkar


Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 June 2022 in Frontiers in Microbiology
Verified
Journal Article
Open access
PSPrashant Raghunath Shingote
Prashant Raghunath Shingote
DWDhiraj Lalji Wasule
Dhiraj Lalji Wasule
VPVaishnavi Sanjay Parma
Vaishnavi Sanjay Parma
SHSomnath K Holkar
Somnath K Holkar
SKSuhas Gorakh Karkute
Suhas Gorakh Karkute
DSD. M. J. B. Senanayake
D. M. J. B. Senanayake
Leaf curl disease in a chili plant is caused mainly by Chili leaf curl virus (ChiLCV) (Family: Geminiviridae, Genus: Begomovirus). ChiLCV shows a widespread occurrence in most of the chili (Capsicum spp.) growing regions. ChiLCV has a limited host range and infects tomatoes (Solanum lycopersicum), potatoes (S. tuberosum), and amaranth (Amaranthus tricolor). The virus genome is a monopartite circular single-stranded DNA molecule of 2.7 kb and associated with α and β-satellites of 1.3 and 1.4 kb, respectively. The virus genome is encapsulated in distinct twinned icosahedral particles of around 18–30 nm in size and transmitted by Bemisia tabaci (Family: Aleyrodidae, Order: Hemiptera). Recently, bipartite begomovirus has been found to be associated with leaf curl disease. The leaf curl disease has a widespread distribution in the major equatorial regions viz., Australia, Asia, Africa, Europe, and America. Besides the PCR, qPCR, and LAMP-based detection systems, recently, localized surface-plasmon-resonance (LPSR) based optical platform is used for ChiLCV detection in a 20–40 μl of sample volume using aluminum nanoparticles. Management of ChiLCV is more challenging due to the vector-borne nature of the virus, therefore integrated disease management strategies need to be followed to contain the spread and heavy crop loss. CRISPR/Cas-mediated virus resistance has gained importance in disease management of DNA and RNA viruses due to certain advantages over the conventional approaches. Therefore, CRISPR/Cas system-mediated resistance needs to be explored in chili against ChiLCV.

1 December 2020 in The Plant Pathology Journal
Verified
Journal Article
Open access
PDF file
SHSomnath K Holkar
Somnath K Holkar
PBParameswari Balasubramaniam
Parameswari Balasubramaniam
AKAtul Kumar
Atul Kumar
NKNithya Kadirvel
Nithya Kadirvel
PSPrashant Raghunath Shingote
Prashant Raghunath Shingote
APAshwini Dutt Pathak
Ashwini Dutt Pathak
Sugarcane yellow leaf virus (SCYLV) is a distinct member of the Polerovirus genus of the Luteoviridae family. SCYLV is the major limitation to sugarcane production worldwide and presently occurring in most of the sugarcane growing countries. SCYLV having high genetic diversity within the species and presently ten genotypes are known to occur based on the complete genome sequence information. SCYLV is present in almost all the states of India where sugarcane is grown. Virion comprises of 180 coat protein units and are 24-29 nm in diameter. The genome of SCYLV is a monopartite and comprised of single-stranded (ss) positive-sense (+) linear RNA of about 6 kb in size. Virus genome consists of six open reading frames (ORFs) that are expressed by sub-genomic RNAs. The SCYLV is phloem-limited and transmitted by sugarcane aphid Melanaphis sacchari in a circulative and non-propagative manner. The other aphid species namely, Ceratovacuna lanigera, Rhopalosiphum rufiabdominalis, and R. maidis also been reported to transmit the virus. The virus is not transmitted mechanically, therefore, its transmission by M. sacchari has been studied in different countries. SCYLV has a limited natural host range and mainly infect sugarcane (Sachharum hybrid), grain sorghum (Sorghum bicolor), and Columbus grass (Sorghum almum). Recent insights in the protein-protein interactions of Polerovirus through protein interaction reporter (PIR) technology enable us to understand viral encoded proteins during virus replication, assembly, plant defence mechanism, short and long-distance travel of the virus. This review presents the recent understandings on virus biology, diagnosis, genetic diversity, virus-vector and host-virus interactions and conventional and next generation management approaches.

7 May 2016 in Journal of Plant Biochemistry and Biotechnology
Verified
Journal Article
Closed access
PDF file
SHSomnath K Holkar
Somnath K Holkar
RKR. Kumar
R. Kumar
MYM. Yogita
M. Yogita
AKA. Katiyar
A. Katiyar
RJR. K. Jain
R. K. Jain
BMBikash Mandal
Bikash Mandal

30 November 2017
Verified
Book Chapter
Closed access
PDF file
BABasavaraj
Basavaraj
BMBikash Mandal
Bikash Mandal
SGS. J. Gawande
S. J. Gawande
PRPerumal Renukadevi
Perumal Renukadevi
SHSomnath K Holkar
Somnath K Holkar
RJRakesh Kumar Jain
Rakesh Kumar Jain

8 February 2019 in Molecular Breeding
Verified
Journal Article
Closed access
PDF file
PSPrashant Shingote
Prashant Shingote
SMS. V. Amitha Mithra
S. V. Amitha Mithra
PSPratima Sharma
Pratima Sharma
NDNavadagi B. Devanna
Navadagi B. Devanna
KAKirti Arora
Kirti Arora
ASAmolkumar Solanke
Amolkumar Solanke

1 July 2023 in 3 Biotech
Verified
Journal Article
Closed access
PDF file
SHSomnath K Holkar
Somnath K Holkar
PGPrabhavati S. Ghotgalkar
Prabhavati S. Ghotgalkar
TLTushar D. Lodha
Tushar D. Lodha
VBVrushali C. Bhanbhane
Vrushali C. Bhanbhane
SSShraddha A. Shewale
Shraddha A. Shewale
SSSujoy Saha
Sujoy Saha