Caghan Kizil

Dr. Caghan Kizil

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Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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7 December 2012 in Science
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Journal Article
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NKNikos Kyritsis
Nikos Kyritsis
CKCaghan Kizil
Caghan Kizil
SZSara Zocher
Sara Zocher
VKVolker Kroehne
Volker Kroehne
Jan KaslinJan Kaslin
Jan Kaslin
MBMichael Brand
Michael Brand
The Good Side of Inflammation: The zebrafish brain is much more adept than the human brain at recovering after traumatic injury. Kyritsis et al. (p. 1353 , published online 8 November; see the Perspective by Stella ) investigated the cellular events that support regeneration in the zebrafish brain. Although inflammation is part of the response in both settings, the zebrafish brain goes on to initiate proliferation of replacement neurons. By inciting inflammation without neuronal damage, radial glial cells could be pushed into neurogenesis.

10 February 2012 in Developmental Neurobiology
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Journal Article
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CKCaghan Kizil
Caghan Kizil
Jan KaslinJan Kaslin
Jan Kaslin
VKVolker Kroehne
Volker Kroehne
MBMichael Brand
Michael Brand

31 May 2020 in Glia
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Journal Article
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NJNathalie Jurisch‐Yaksi
Nathalie Jurisch‐Yaksi
EYEmre Yaksi
Emre Yaksi
CKCaghan Kizil
Caghan Kizil
The neuroscience community has witnessed a tremendous expansion of glia research. Glial cells are now on center stage with leading roles in the development, maturation, and physiology of brain circuits. Over the course of evolution, glia have highly diversified and include the radial glia, astroglia or astrocytes, microglia, oligodendrocytes, and ependymal cells, each having dedicated functions in the brain. The zebrafish, a small teleost fish, is no exception to this and recent evidences point to evolutionarily conserved roles for glia in the development and physiology of its nervous system. Due to its small size, transparency, and genetic amenability, the zebrafish has become an increasingly prominent animal model for brain research. It has enabled the study of neural circuits from individual cells to entire brains, with a precision unmatched in other vertebrate models. Moreover, its high neurogenic and regenerative potential has attracted a lot of attention from the research community focusing on neural stem cells and neurodegenerative diseases. Hence, studies using zebrafish have the potential to provide fundamental insights about brain development and function, and also elucidate neural and molecular mechanisms of neurological diseases. We will discuss here recent discoveries on the diverse roles of radial glia and astroglia in neurogenesis, in modulating neuronal activity and in regulating brain homeostasis at the brain barriers. By comparing insights made in various animal models, particularly mammals and zebrafish, our goal is to highlight the similarities and differences in glia biology among species, which could set new paradigms relevant to humans.

4 March 2015 in EMBO Reports
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Journal Article
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CKCaghan Kizil
Caghan Kizil
NKNikos Kyritsis
Nikos Kyritsis
MBMichael Brand
Michael Brand

1 October 2016 in Cell Reports
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Journal Article
Open access
PBPrabesh Bhattarai
Prabesh Bhattarai
ATAlvin Kuriakose Thomas
Alvin Kuriakose Thomas
MCMehmet Ilyas Cosacak
Mehmet Ilyas Cosacak
CPChristos Papadimitriou
Christos Papadimitriou
VMVioleta Mashkaryan
Violeta Mashkaryan
CKCaghan Kizil
Caghan Kizil
Human brains are prone to neurodegeneration, given that endogenous neural stem/progenitor cells (NSPCs) fail to support neurogenesis. To investigate the molecular programs potentially mediating neurodegeneration-induced NSPC plasticity in regenerating organisms, we generated an Amyloid-β42 (Aβ42)-dependent neurotoxic model in adult zebrafish brain through cerebroventricular microinjection of cell-penetrating Aβ42 derivatives. Aβ42 deposits in neurons and causes phenotypes reminiscent of amyloid pathophysiology: apoptosis, microglial activation, synaptic degeneration, and learning deficits. Aβ42 also induces NSPC proliferation and enhanced neurogenesis. Interleukin-4 (IL4) is activated primarily in neurons and microglia/macrophages in response to Aβ42 and is sufficient to increase NSPC proliferation and neurogenesis via STAT6 phosphorylation through the IL4 receptor in NSPCs. Our results reveal a crosstalk between neurons and immune cells mediated by IL4/STAT6 signaling, which induces NSPC plasticity in zebrafish brains.

23 August 2019 in Nature Communications
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CVCarmen Diaz Verdugo
Carmen Diaz Verdugo
SMSverre Myren-Svelstad
Sverre Myren-Svelstad
EAEcem Aydin
Ecem Aydin
EHEvelien Van Hoeymissen
Evelien Van Hoeymissen
CDCeline Deneubourg
Celine Deneubourg
EYEmre Yaksi
Emre Yaksi
Brain activity and connectivity alter drastically during epileptic seizures. The brain networks shift from a balanced resting state to a hyperactive and hypersynchronous state. It is, however, less clear which mechanisms underlie the state transitions. By studying neural and glial activity in zebrafish models of epileptic seizures, we observe striking differences between these networks. During the preictal period, neurons display a small increase in synchronous activity only locally, while the gap-junction-coupled glial network was highly active and strongly synchronized across large distances. The transition from a preictal state to a generalized seizure leads to an abrupt increase in neural activity and connectivity, which is accompanied by a strong alteration in glia-neuron interactions and a massive increase in extracellular glutamate. Optogenetic activation of glia excites nearby neurons through the action of glutamate and gap junctions, emphasizing a potential role for glia-glia and glia-neuron connections in the generation of epileptic seizures.