W. Ryan James

Dr. W. Ryan James


Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 March 2024 in Chemosphere
Verified
Journal Article
Open access
VRVincent Raoult
Vincent Raoult
APAlexandra A. Phillips
Alexandra A. Phillips
JNJames Nelson
James Nelson
YNYuri Niella
Yuri Niella
CSChristina Skinner
Christina Skinner
CHChris Harrod
Chris Harrod
Over the last few decades, measurements of light stable isotope ratios have been increasingly used to answer questions across physiology, biology, ecology, and archaeology. The vast majority analyse carbon (δ13C) and nitrogen (δ15N) stable isotopes as the 'default' isotopes, omitting sulfur (δ34S) due to time, cost, or perceived lack of benefits and instrumentation capabilities. Using just carbon and nitrogen isotopic ratios can produce results that are inconclusive, uncertain, or in the worst cases, even misleading, especially for scientists that are new to the use and interpretation of stable isotope data. Using sulfur isotope values more regularly has the potential to mitigate these issues, especially given recent advancements that have lowered measurement barriers. Here we provide a review documenting case studies with real-world data, re-analysing different biological topics (i.e. niche, physiology, diet, movement and bioarchaeology) with and without sulfur isotopes to highlight the various strengths of this stable isotope for various applications. We also include a preliminary meta-analysis of the trophic discrimination factor (TDF) for sulfur isotopes, which suggest small (mean -0.4 ± 1.7 ‰ SD) but taxa-dependent mean trophic discrimination. Each case study demonstrates how the exclusion of sulfur comes at the detriment of the results, often leading to very different outputs, or missing valuable discoveries entirely. Given that studies relying on carbon and nitrogen stable isotopes currently underpin most of our understanding of various ecological processes, this has concerning implications. Collectively, these examples strongly suggest that researchers planning to use carbon and nitrogen stable isotopes for their research should incorporate sulfur where possible, and that the new 'default' isotope systems for aquatic science should now be carbon, nitrogen, and sulfur.

1 April 2020 in Science of The Total Environment
Verified
Journal Article
Closed access
WJW. Ryan James
W. Ryan James
JLJustin S. Lesser
Justin S. Lesser
SLSteven Y. Litvin
Steven Y. Litvin
JNJames Nelson
James Nelson

15 July 2023 in Limnology and Oceanography Letters
Verified
Journal Article
Open access
EYErik Yando
Erik Yando
SJScott F. Jones
Scott F. Jones
WJW. Ryan James
W. Ryan James
DCDenise D. Colombano
Denise D. Colombano
DMDiana I. Montemayor
Diana I. Montemayor
LSLiudmila Sergienko
Liudmila Sergienko
Salt marshes occur globally across climatic and coastal settings, providing key linkages between terrestrial and marine ecosystems. However, salt marsh science lacks a unifying conceptual framework; consequently, historically well‐studied locations have been used as normative benchmarks. To allow for more effective comparisons across the diversity of salt marshes, we developed an integrative salt marsh conceptual framework. We review ecosystem‐relevant drivers from global to local spatial scales, integrate these multi‐scale settings into a framework, and provide guidance on applying the framework using specific variables on 11 global examples. Overall, this framework allows for appropriate comparison of study sites by accounting for global, coastal, inter‐, and intra‐system spatial settings unique to each salt marsh. We anticipate that incorporating this framework into salt marsh science will provide a mechanism to critically evaluate research questions and a foundation for effective quantitative studies that deepen our understanding of salt marsh function across spatial scales.

22 April 2024 in Fish and Fisheries
Verified
Journal Article
Closed access
BJBenjamin Jones
Benjamin Jones
RSRolando O. Santos
Rolando O. Santos
WJW. Ryan James
W. Ryan James
SCSophia V. Costa
Sophia V. Costa
AAAaron J. Adams
Aaron J. Adams
JRJennifer S. Rehage
Jennifer S. Rehage

13 November 2022 in Movement Ecology
Verified
Journal Article
Open access
PDF file
JMJordan A. Massie
Jordan A. Massie
RSRolando O. Santos
Rolando O. Santos
RRRyan J. Rezek
Ryan J. Rezek
WJW. Ryan James
W. Ryan James
NVNatasha M. Viadero
Natasha M. Viadero
JRJennifer S. Rehage
Jennifer S. Rehage
Background: Spawning migrations are a widespread phenomenon among fishes, often occurring in response to environmental conditions prompting movement into reproductive habitats (migratory cues). However, for many species, individual fish may choose not to migrate, and research suggests that conditions preceding the spawning season (migratory primers) may influence this decision. Few studies have provided empirical descriptions of these prior conditions, partly due to a lack of long-term data allowing for robust multi-year comparisons. To investigate how primers and cues interact to shape the spawning migrations of coastal fishes, we use acoustic telemetry data from Common Snook (Centropomus undecimalis) in Everglades National Park, Florida, USA. A contingent of Snook migrate between rivers and coastal spawning sites, varying annually in both the proportion of the population that migrates and the timing of migration within the spawning season. However, the specific environmental factors that serve as migratory primers and cues remain unknown.Methods: We used eight years of acoustic telemetry data (2012–2019) from 173 tagged Common Snook to investigate how primers and cues influence migratory patterns at different temporal scales. We hypothesize that (1) interannual differences in hydrologic conditions preceding the spawning season contribute to the number of individuals migrating each year, and (2) specific environmental cues trigger the timing of migrations during the spawning season. We used GLMMs to model both the annual and seasonal migratory response in relation to flow characteristics (water level, rate of change in water level), other hydrologic/abiotic conditions (temperature, salinity), fish size, and phenological cues independent of riverine conditions (photoperiod, lunar cycle).Results: We found that the extent of minimum marsh water level prior to migration and fish size influence the proportion of Snook migrating each year, and that high river water level and daily rates of change serve as primary cues triggering migration timing.Conclusion: Our findings illustrate how spawning migrations are shaped by environmental factors acting at different temporal scales and emphasize the importance of long-term movement data in understanding these patterns. Research providing mechanistic descriptions of conditions that promote migration and reproduction can help inform management decisions aimed at conserving ecologically and economically important species.

30 November 2017 in Ecosphere
Verified
Journal Article
Open access
PDF file
KSK. E. Smith
K. E. Smith
RAR. B. Aronson
R. B. Aronson
BSB. V. Steffel
B. V. Steffel
MAM. O. Amsler
M. O. Amsler
STS. Thatje
S. Thatje
JMJ. B. McClintock
J. B. McClintock
Historically low temperatures have severely limited skeleton‐breaking predation on the Antarctic shelf, facilitating the evolution of a benthic fauna poorly defended against durophagy. Now, rapid warming of the Southern Ocean is restructuring Antarctic marine ecosystems as conditions become favorable for range expansions. Populations of the lithodid crab Paralomis birsteini currently inhabit some areas of the continental slope off Antarctica. They could potentially expand along the slope and upward to the outer continental shelf, where temperatures are no longer prohibitively low. We identified two sites inhabited by different densities of lithodids in the slope environment along the western Antarctic Peninsula. Analysis of the gut contents of P. birsteini trapped on the slope revealed them to be opportunistic invertivores. The abundances of three commonly eaten, eurybathic taxa—ophiuroids, echinoids, and gastropods—were negatively associated with P. birsteini off Marguerite Bay, where lithodid densities averaged 4280 ind/km2 at depths of 1100–1499 m (range 3440–5010 ind/km2), but not off Anvers Island, where lithodid densities were lower, averaging 2060 ind/km2 at these depths (range 660–3270 ind/km2). Higher abundances of lithodids appear to exert a negative effect on invertebrate distribution on the slope. Lateral or vertical range expansions of P. birsteini at sufficient densities could substantially reduce populations of their benthic prey off Antarctica, potentially exacerbating the direct impacts of rising temperatures on the distribution and diversity of the contemporary shelf benthos.