Tan Li

Dr. Tan Li


Research Focus & Metrics

Academic Career Length

17Years (2010-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2013 in The Plant Cell
Verified
Journal Article
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TLTan Li
Tan Li
SEStefan Eberhard
Stefan Eberhard
SPSivakumar Pattathil
Sivakumar Pattathil
CWClayton Warder
Clayton Warder
JGJohn Glushka
John Glushka
DMDebra Mohnen
Debra Mohnen
Plant cell walls are comprised largely of the polysaccharides cellulose, hemicellulose, and pectin, along with ∼10% protein and up to 40% lignin. These wall polymers interact covalently and noncovalently to form the functional cell wall. Characterized cross-links in the wall include covalent linkages between wall glycoprotein extensins between rhamnogalacturonan II monomer domains and between polysaccharides and lignin phenolic residues. Here, we show that two isoforms of a purified Arabidopsis thaliana arabinogalactan protein (AGP) encoded by hydroxyproline-rich glycoprotein family protein gene At3g45230 are covalently attached to wall matrix hemicellulosic and pectic polysaccharides, with rhamnogalacturonan I (RG I)/homogalacturonan linked to the rhamnosyl residue in the arabinogalactan (AG) of the AGP and with arabinoxylan attached to either a rhamnosyl residue in the RG I domain or directly to an arabinosyl residue in the AG glycan domain. The existence of this wall structure, named ARABINOXYLAN PECTIN ARABINOGALACTAN PROTEIN1 (APAP1), is contrary to prevailing cell wall models that depict separate protein, pectin, and hemicellulose polysaccharide networks. The modified sugar composition and increased extractability of pectin and xylan immunoreactive epitopes in apap1 mutant aerial biomass support a role for the APAP1 proteoglycan in plant wall architecture and function.

14 November 2022 in Carbohydrate Polymers
Verified
Journal Article
Closed access
TLTan Li
Tan Li
LZLiang Zhang
Liang Zhang
IBIan Black
Ian Black
JGJohn Glushka
John Glushka
BUBreeanna Urbanowicz
Breeanna Urbanowicz
PAParastoo Azadi
Parastoo Azadi

30 January 2010 in Transgenic Research
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Jianfeng XuJianfeng Xu
Jianfeng Xu
SOShigeru Okada
Shigeru Okada
TLTan Li
Tan Li
KGKenneth J. Goodrum
Kenneth J. Goodrum
JKJohn J. Kopchick
John J. Kopchick
MKMarcia J. Kieliszewski
Marcia J. Kieliszewski

17 January 2018 in Biotechnology for Biofuels
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Journal Article
Open access
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Ajaya Kumar BiswalAjaya Kumar Biswal
Ajaya Kumar Biswal
MAMelani A. Atmodjo
Melani A. Atmodjo
SPSivakumar Pattathil
Sivakumar Pattathil
RARobert A. Amos
Robert A. Amos
Xiaohan YangXiaohan Yang
Xiaohan Yang
DMDebra Mohnen
Debra Mohnen
The development of fast-growing hardwood trees as a source of lignocellulosic biomass for biofuel and biomaterial production requires a thorough understanding of the plant cell wall structure and function that underlie the inherent recalcitrance properties of woody biomass. Downregulation of GAUT12.1 in Populus deltoides was recently reported to result in improved biomass saccharification, plant growth, and biomass yield. To further understand GAUT12.1 function in biomass recalcitrance and plant growth, here we report the effects of P. trichocarpa GAUT12.1 overexpression in P. deltoides. Increasing GAUT12.1 transcript expression by 7–49% in P. deltoides PtGAUT12.1-overexpression (OE) lines resulted in a nearly complete opposite biomass saccharification and plant growth phenotype to that observed previously in PdGAUT12.1-knockdown (KD) lines. This included significantly reduced glucose, xylose, and total sugar release (12–13%), plant height (6–54%), stem diameter (8–40%), and overall total aerial biomass yield (48–61%) in 3-month-old, greenhouse-grown PtGAUT12.1-OE lines compared to controls. Total lignin content was unaffected by the gene overexpression. Importantly, selected PtGAUT12.1-OE lines retained the recalcitrance and growth phenotypes upon growth for 9 months in the greenhouse and 2.8 years in the field. PtGAUT12.1-OE plants had significantly smaller leaves with lower relative water content, and significantly reduced stem wood xylem cell numbers and size. At the cell wall level, xylose and galacturonic acid contents increased markedly in total cell walls as well as in soluble and insoluble cell wall extracts, consistent with increased amounts of xylan and homogalacturonan in the PtGAUT12.1-OE lines. This led to increased cell wall recalcitrance, as manifested by the 9–15% reduced amounts of recovered extractable wall materials and 8–15% greater amounts of final insoluble pellet in the PtGAUT12.1-OE lines compared to controls. The combined phenotype and chemotype data from P. deltoides PtGAUT12.1-OE and PdGAUT12.1-KD transgenics clearly establish GAUT12.1 as a recalcitrance- and growth-associated gene in poplar. Overall, the data support the hypothesis that GAUT12.1 synthesizes either an HG-containing primer for xylan synthesis or an HG glycan required for proper xylan deposition, anchoring, and/or architecture in the wall, and the possibility of HG and xylan glycans being connected to each other by a base-sensitive covalent linkage.

21 January 2024 in Carbohydrate Polymers
Verified
Journal Article
Closed access
TLTan Li
Tan Li
JCJielun Cheng
Jielun Cheng
LZLiang Zhang
Liang Zhang
JBJason Backe
Jason Backe
BUBreeanna Urbanowicz
Breeanna Urbanowicz
PAParastoo Azadi
Parastoo Azadi

Verified
Journal Article
Open access
PDF file
QWqiao wang
qiao wang
SSShangfa Song
Shangfa Song
XLXintong Lu
Xintong Lu
YWYiqing Wang
Yiqing Wang
YCYan Chen
Yan Chen
GCGuohua Chai
Guohua Chai
CCCH zinc finger proteins contain one to six tandem CCCH motifs composed of three cysteine and one histidine residues and have been widely found in eukaryotes. Plant CCCH proteins control a wide range of developmental and adaptive processes through DNA–protein, RNA–protein and/or protein–protein interactions. The complex networks underlying these processes regulated by plant CCCH proteins are often involved in phytohormones as signal molecules. In this review, we described the evolution of CCCH proteins from green algae to vascular plants and summarized the functions of plant CCCH proteins that are influenced by six major hormones, including abscisic acid, gibberellic acid, brassinosteroid, jasmonate, ethylene and auxin. We further compared the regulatory mechanisms of plant and animal CCCH proteins via hormone signaling. Among them, Arabidopsis AtC3H14, 15 and human hTTP, three typical CCCH proteins, are able to integrate multiple hormones to participate in various biological processes.