Riikka Linnakoski

Dr. Riikka Linnakoski


Research Focus & Metrics

Academic Career Length

19Years (2008-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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23 December 2010 in Persoonia - Molecular Phylogeny and Evolution of Fungi
Verified
Journal Article
Open access
RLRiikka Linnakoski
Riikka Linnakoski
ZBZ. Wilhelm De Beer
Z. Wilhelm De Beer
JAJ. Ahtiainen
J. Ahtiainen
ESE. Sidorov
E. Sidorov
PNP. Niemelä
P. Niemelä
MWM.J. Wingfield
M.J. Wingfield
The timber and pulp industries of Finland rely heavily on importations from Russia as source of raw timber. These imports raise the risk of accidentally importing forest pests and pathogens, especially bark beetles and their associated fungi, into Finland. Although ophiostomatoid fungi have previously been reported from Finland and Russia, the risks of accidentally moving these fungi has prompted a first survey to compare the diversity of conifer-infesting bark beetles and associated fungi from boreal forests on both sides of the Finnish-Russian border. The aim of the present study was to identify and characterise Ophiostoma species isolated in association with 11 bark beetle species infesting Pinus sylvestris and Picea abies during this survey in the eastern parts of Finland and neighbouring Russia. Fungal isolates were grouped based on morphology and representatives of each morphological group were subjected to DNA sequence comparisons of the internal transcribed spaced region (ITS1, 5.8S, ITS2) and β-tubulin gene region. A total of 15 species of Ophiostoma were identified, including seven known species, five new species, and three species for which the identity remains uncertain. In the O. piceae-complex we identified O. canum, O. floccosum, O. karelicum and O. rachisporum sp. nov., and related to these, some isolates belonging to the European clade of O. minus in the O. minus-complex. Ophiostoma bicolor and O. fuscum sp. nov. were identified in the O. ips -complex, while O. ainoae, O. brunneo-ciliatum, O. tapionis sp. nov. and O. pallidulum sp. nov. were shown to group close to, but not in a strict monophyletic lineage with species of the O. ips-complex. Together with a single O. abietinum-like isolate, the only species that grouped close to the Sporothrix schenckii- O. stenoceras complex, was O. saponiodorum sp. nov.

2 October 2018 in Frontiers in Microbiology
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Journal Article
Open access
PDF file
RLRiikka Linnakoski
Riikka Linnakoski
DRDhanik Reshamwala
Dhanik Reshamwala
PVPyry Veteli
Pyry Veteli
MCMarta Cortina-Escribano
Marta Cortina-Escribano
HVHenri Vanhanen
Henri Vanhanen
VMVarpu Marjomäki
Varpu Marjomäki
Viral infections are amongst the most common diseases affecting people worldwide. New viruses emerge all the time and presently we have limited number of vaccines and only few antivirals to combat viral diseases. Fungi represent a vast source of bioactive molecules, which could potentially be used as antivirals in the future. Here, we have summarized the current knowledge of fungi as producers of antiviral compounds and discuss their potential applications. In particular, we have investigated how the antiviral action has been assessed and what is known about the molecular mechanisms and actual targets. Furthermore, we highlight the importance of accurate fungal species identification on antiviral and other natural products studies.

15 February 2012 in Insects
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Journal Article
Open access
PDF file
RLRiikka Linnakoski
Riikka Linnakoski
ZBZ. Wilhelm De Beer
Z. Wilhelm De Beer
PNPekka Niemelä
Pekka Niemelä
MWMichael J. Wingfield
Michael J. Wingfield
Bark beetles (Coleoptera, Scolytinae) have a widespread association with fungi, especially with ophiostomatoid fungi (Ascomycota) that cause blue staining of wood, and in some cases, serious tree diseases. In Fennoscandia, most studies of these fungi have focused on economically important bark beetle species and this is likely to have led to a biased view of the fungal biodiversity in the region. Recently, the associations between fungi and bark beetles in Fennoscandia have been shown to be more diverse than previously thought. Furthermore, they form complex and dynamic associations that are only now beginning to emerge. This review examines the current knowledge of the rather poorly known interactions between bark beetles, fungi and their conifer host trees in Fennoscandia. The diversity of ophiostomatoid species is discussed and the possible factors that influence the assemblages of fungal associates are considered for all species that are known to occur in the region. For many ophiostomatoid species found in Fennoscandia, little or nothing is known regarding their pathogenicity, particularly if they were to be transferred to new environments. We, therefore, draw attention to the possible threats of timber trade and climate change-induced invasions of new habitats by bark beetles and the fungi that can be moved along with them.

15 October 2019 in Frontiers in Plant Science
Verified
Journal Article
Open access
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RLRiikka Linnakoski
Riikka Linnakoski
RKRisto Kasanen
Risto Kasanen
ADAikaterini Dounavi
Aikaterini Dounavi
KFKristian M. Forbes
Kristian M. Forbes
Editorial: Forest Health Under Climate Change: Effects on Tree Resilience, and Pest and Pathogen Dynamics

13 May 2012 in Antonie van Leeuwenhoek
Verified
Journal Article
Closed access
PDF file
RLRiikka Linnakoski
Riikka Linnakoski
ZBZ. Wilhelm De Beer
Z. Wilhelm De Beer
ADAnh Tuan Duong
Anh Tuan Duong
PNPekka Niemelä
Pekka Niemelä
APAri Pappinen
Ari Pappinen
MWMichael J. Wingfield
Michael J. Wingfield

3 May 2016 in Antonie van Leeuwenhoek
Verified
Journal Article
Closed access
PDF file
RLRiikka Linnakoski
Riikka Linnakoski
RJRobert Jankowiak
Robert Jankowiak
CVCaterina Villari
Caterina Villari
TKThomas Kirisits
Thomas Kirisits
HSHalvor Solheim
Halvor Solheim
MWMichael J. Wingfield
Michael J. Wingfield