Ramakrishnapillai Vyomakesannair Omkumar

Dr. Ramakrishnapillai Vyomakesannair Omkumar

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Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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28 September 2009 in Chemistry – A European Journal
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Journal Article
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MMMadathumpady Abubaker Habeeb Muhammed
Madathumpady Abubaker Habeeb Muhammed
PVPramod Kumar Verma
Pramod Kumar Verma
DPDr Samir Kumar Pal
Dr Samir Kumar Pal
RKR. C. Arun Kumar
R. C. Arun Kumar
SPSoumya Paul
Soumya Paul
TPThalappil Pradeep
Thalappil Pradeep

15 June 2009 in Journal of Neurochemistry
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Journal Article
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RRRajeevkumar Raveendran
Rajeevkumar Raveendran
SPSudarsana Devi Suma Priya
Sudarsana Devi Suma Priya
MMMadhavan Mayadevi
Madhavan Mayadevi
MSMathew Steephan
Mathew Steephan
TSThankayyan R. Santhoshkumar
Thankayyan R. Santhoshkumar
RORamakrishnapillai Vyomakesannair Omkumar
Ramakrishnapillai Vyomakesannair Omkumar

1 January 2019 in Journal of Chemical Neuroanatomy
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Journal Article
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RCRemya Chandran
Remya Chandran
MKMantosh Kumar
Mantosh Kumar
LKLakshmi Kesavan
Lakshmi Kesavan
RJReena Sarah Jacob
Reena Sarah Jacob
SGSowmya Gunasekaran
Sowmya Gunasekaran
RORamakrishnapillai Vyomakesannair Omkumar
Ramakrishnapillai Vyomakesannair Omkumar

20 June 2022 in Frontiers in Molecular Neuroscience
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Journal Article
Open access
AMArchana G. Mohanan
Archana G. Mohanan
SGSowmya Gunasekaran
Sowmya Gunasekaran
RJReena Sarah Jacob
Reena Sarah Jacob
RORamakrishnapillai Vyomakesannair Omkumar
Ramakrishnapillai Vyomakesannair Omkumar
Glutamatergic synapses harbor abundant amounts of the multifunctional Ca2+/calmodulin-dependent protein kinase type II (CaMKII). Both in the postsynaptic density as well as in the cytosolic compartment of postsynaptic terminals, CaMKII plays major roles. In addition to its Ca2+-stimulated kinase activity, it can also bind to a variety of membrane proteins at the synapse and thus exert spatially restricted activity. The abundance of CaMKII in glutamatergic synapse is akin to scaffolding proteins although its prominent function still appears to be that of a kinase. The multimeric structure of CaMKII also confers several functional capabilities on the enzyme. The versatility of the enzyme has prompted hypotheses proposing several roles for the enzyme such as Ca2+ signal transduction, memory molecule function and scaffolding. The article will review the multiple roles played by CaMKII in glutamatergic synapses and how they are affected in disease conditions.

3 August 2021 in Computational and Structural Biotechnology Journal
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CRChandran Remya
Chandran Remya
KDK.V. Dileep
K.V. Dileep
EREeda Koti Reddy
Eeda Koti Reddy
KMKumar Mantosh
Kumar Mantosh
KLKesavan Lakshmi
Kesavan Lakshmi
RORamakrishnapillai Vyomakesannair Omkumar
Ramakrishnapillai Vyomakesannair Omkumar
The complex and multifactorial nature of neuropsychiatric diseases demands multi-target drugs that can intervene with various sub-pathologies underlying disease progression. Targeting the impairments in cholinergic and glutamatergic neurotransmissions with small molecules has been suggested as one of the potential disease-modifying approaches for Alzheimer’s disease (AD). Tacrine, a potent inhibitor of acetylcholinesterase (AChE) is the first FDA approved drug for the treatment of AD. Tacrine is also a low affinity antagonist of N-methyl-D-aspartate receptor (NMDAR). However, tacrine was withdrawn from its clinical use later due to its hepatotoxicity. With an aim to develop novel high affinity multi-target directed ligands (MTDLs) against AChE and NMDAR, with reduced hepatotoxicity, we performed in silico structure-based modifications on tacrine, chemical synthesis of the derivatives and in vitro validation of their activities. Nineteen such derivatives showed inhibition with IC50 values in the range of 18.53 ± 2.09 – 184.09 ± 19.23 nM against AChE and 0.27 ± 0.05 – 38.84 ± 9.64 μM against NMDAR. Some of the selected compounds also protected rat primary cortical neurons from glutamate induced excitotoxicity. Two of the tacrine derived MTDLs, 201 and 208 exhibited in vivo efficacy in rats by protecting against behavioral impairment induced by administration of the excitotoxic agent, monosodium glutamate. Additionally, several of these synthesized compounds also exhibited promising inhibitory activitiy against butyrylcholinesterase. MTDL-201 was also devoid of hepatotoxicity in vivo. Given the therapeutic potential of MTDLs in disease-modifying therapy, our studies revealed several promising MTDLs among which 201 appears to be a potential candidate for immediate preclinical evaluations.

15 March 2011 in PLOS ONE
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JCJohn Cheriyan
John Cheriyan
PKParimal Kumar
Parimal Kumar
MMMadhavan Mayadevi
Madhavan Mayadevi
ASAvadhesha Surolia
Avadhesha Surolia
RORamakrishnapillai Vyomakesannair Omkumar
Ramakrishnapillai Vyomakesannair Omkumar
Calcium/calmodulin dependent protein kinase II (CaMKII) is implicated to play a key role in learning and memory. NR2B subunit of N-methyl-D-aspartate receptor (NMDAR) is a high affinity binding partner of CaMKII at the postsynaptic membrane. NR2B binds to the T-site of CaMKII and modulates its catalysis. By direct measurement using isothermal titration calorimetry (ITC), we show that NR2B binding causes about 11 fold increase in the affinity of CaMKII for ATPγS, an analogue of ATP. ITC data is also consistent with an ordered binding mechanism for CaMKII with ATP binding the catalytic site first followed by peptide substrate. We also show that dephosphorylation of phospho-Thr286-α-CaMKII is attenuated when NR2B is bound to CaMKII. This favors the persistence of Thr286 autophosphorylated state of CaMKII in a CaMKII/phosphatase conjugate system in vitro. Overall our data indicate that the NR2B- bound state of CaMKII attains unique biochemical properties which could help in the efficient functioning of the proposed molecular switch supporting synaptic memory.