Andrés Zárate-Romero

Dr. Andrés Zárate-Romero


Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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22 April 2021 in Pharmaceutics
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CBCristina Díaz Barriga
Cristina Díaz Barriga
FVFrancisca Villanueva-Flores
Francisca Villanueva-Flores
KQKatrin Quester
Katrin Quester
AZAndrés Zárate-Romero
Andrés Zárate-Romero
RCRuben Cadena-Nava
Ruben Cadena-Nava
AHAlejandro Huerta-Saquero
Alejandro Huerta-Saquero
Asparaginase (ASNase) is a biopharmaceutical for Acute Lymphoblastic Leukemia (ALL) treatment. However, it shows undesirable side effects such as short lifetimes, susceptibility to proteases, and immunogenicity. Here, ASNase encapsidation was genetically directed in bacteriophage P22-based virus-like particles (VLPs) (ASNase-P22 nanoreactors) as a strategy to overcome these challenges. ASNase-P22 was composed of 58.4 ± 7.9% of coat protein and 41.6 ± 8.1% of tetrameric ASNase. Km and Kcat values of ASNase-P22 were 15- and 2-fold higher than those obtained for the free enzyme, respectively. Resulting Kcat/Km value was 2.19 × 105 M−1 s−1. ASNase-P22 showed an aggregation of 60% of the volume sample when incubated at 37 °C for 12 days. In comparison, commercial asparaginase was completely aggregated under the same conditions. ASNase-P22 was stable for up to 24 h at 37 °C, independent of the presence of human blood serum (HBS) or whether ASNase-P22 nanoreactors were uncoated or PEGylated. Finally, we found that ASNase-P22 caused cytotoxicity in the leukemic cell line MOLT-4 in a concentration dependent manner. To our knowledge, this is the first work where ASNase is encapsulated inside of VLPs, as a promising alternative to fight ALL.

19 November 2021 in Pharmaceutics
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Journal Article
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FVFrancisca Villanueva-Flores
Francisca Villanueva-Flores
AZAndrés Zárate-Romero
Andrés Zárate-Romero
ATAlfredo Torres
Alfredo Torres
AHAlejandro Huerta-Saquero
Alejandro Huerta-Saquero
Asparaginase (ASNase) is a widely applied chemotherapeutic drug that is used to treat Acute Lymphoblastic Leukemia (ALL); however, immune responses and silent inactivation of the drug often limit its bioavailability. Many strategies have been proposed to overcome these drawbacks, including the development of improved formulations (biobetters), but only two of them are currently on the market. Nano- and micro-encapsulation are some of the most promising and novel approaches to enhance in vivo performance of ASNase, preventing the direct contact of the enzyme with the environment, protecting it from protease degradation, increasing the enzymes catalytic half-life, and in some cases, reducing immunogenicity. This review summarizes the strategies, particularly for ASNase nano- and micro-encapsulation, and their main findings, constraints, and current gaps in the state-of-the-art knowledge. The pros and cons of the use of different nanocarriers are discussed with the idea to ultimately provide safer and more effective treatments for patients with ALL.

29 March 2016 in Biochemical Journal
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AZAndrés Zárate-Romero
Andrés Zárate-Romero
DMDarío S. Murillo-Melo
Darío S. Murillo-Melo
CMCarlos Mújica-Jiménez
Carlos Mújica-Jiménez
CMCarmina Montiel
Carmina Montiel
RMRosario A. Muñoz-Clares
Rosario A. Muñoz-Clares
In plants, the last step in the biosynthesis of the osmoprotectant glycine betaine (GB) is the NAD+-dependent oxidation of betaine aldehyde (BAL) catalyzed by some ALDH10 enzymes that exhibit betaine aldehyde dehydrogenase (BADH) activity. Given the irreversibility of the reaction, the short-term regulation of these enzymes is of great physiological relevance to avoid adverse NAD+/NADH ratio decreases. We here report that the Spinacia oleracea betaine aldehyde dehydrogenase ( So BADH) is reversibly and partially inactivated by BAL in the absence of NAD+ in a time- and concentration-dependent mode. Crystallographic evidence indicates that the non-essential Cys450 ( So BADH numbering) forms a thiohemiacetal with BAL, totally blocking the productive binding of the aldehyde. Interestingly, in contrast with Cys450 the catalytic cysteine (Cys291) did not react with BAL in the absence of NAD+. The trimethylammonium group of BAL binds in the same position in the inactivating or productive modes. Accordingly, BAL does not inactivate the C450S So BADH mutant and the degree of inactivation of the A441I and A441C mutants corresponds to their very different ability to bind the trimethylammonium group. Cys450 and the neighboring residues that participate in stabilization of the thiohemiacetal are strictly conserved in plant ALDH10 enzymes with proven or predicted BADH activity, suggesting that inactivation by BAL is a common feature of them. Under osmotic stress conditions, this novel partial and reversible covalent regulatory mechanism may contribute to prevent NAD+ exhaustion, while still permitting the synthesis of high amounts of GB and avoiding the accumulation of the toxic BAL.

27 June 2013 in Acta Crystallographica Section F Structural Biology and Crystallization Communications
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AZAndrés Zárate-Romero
Andrés Zárate-Romero
VSVivian Stojanoff
Vivian Stojanoff
SRSonia Patricia Rojas-Trejo
Sonia Patricia Rojas-Trejo
WHWilhelm Hansberg
Wilhelm Hansberg
EREnrique Rudino-Pinera
Enrique Rudino-Pinera
Polymorphism is frequently observed from different crystallization conditions. In proteins, the effect on conformational variability is poorly documented, with only a few reported examples. Here, three polymorphic crystal structures determined for a large-subunit catalase, CAT-3 from Neurospora crassa, are reported. Two of them belonged to new space groups, P1 and P43212, and a third structure belonged to the same space group, P212121, as the previously deposited 2.3 Å resolution structure (PDB entry 3ej6 ), but had a higher resolution (1.95 Å). Comparisons between these polymorphic structures highlight the conformational stability of tetrameric CAT-3 and reveal a distortion in the tetrameric structure that has not previously been described.

9 March 2017 in Proteins: Structure, Function, and Bioinformatics
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ARAyixon Sanchez Reyes
Ayixon Sanchez Reyes
RGRamón Alberto Batista García
Ramón Alberto Batista García
GVGilberto Valdés‐García
Gilberto Valdés‐García
EOErnesto Ortiz
Ernesto Ortiz
LPLucía Perezgasga
Lucía Perezgasga
JFJorge Folch-Mallol
Jorge Folch-Mallol

1 July 2019 in Protein Expression and Purification
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Journal Article
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JFJorge Folch-Mallol
Jorge Folch-Mallol
AZAndrés Zárate-Romero
Andrés Zárate-Romero
ARAyixon Sanchez Reyes
Ayixon Sanchez Reyes
ILIsabel M. López- Lara
Isabel M. López- Lara