Mailyn Pérez-Liva

Dr. Mailyn Pérez-Liva

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Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 March 2017 in The Journal of the Acoustical Society of America
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MPMailyn Pérez-Liva
Mailyn Pérez-Liva
JHJOAQUIN L. HERRAIZ
JOAQUIN L. HERRAIZ
JUJose MANUEL Udias
Jose MANUEL Udias
EME. Miller
E. Miller
Ben CoxBen Cox
Ben Cox
BTB. E. Treeby
B. E. Treeby
Ultrasound computed tomography (USCT) is a non-invasive imaging technique that provides information about the acoustic properties of soft tissues in the body, such as the speed of sound (SS) and acoustic attenuation (AA). Knowledge of these properties can improve the discrimination between benign and malignant masses, especially in breast cancer studies. Full wave inversion (FWI) methods for image reconstruction in USCT provide the best image quality compared to more approximate methods. Using FWI, the SS is usually recovered in the time domain, and the AA is usually recovered in the frequency domain. Nevertheless, as both properties can be obtained from the same data, it is desirable to have a common framework to reconstruct both distributions. In this work, an algorithm is proposed to reconstruct both the SS and AA distributions using a time domain FWI methodology based on the fractional Laplacian wave equation, an adjoint field formulation, and a gradient-descent method. The optimization code employs a Compute Unified Device Architecture version of the software k-Wave, which provides high computational efficiency. The performance of the method was evaluated using simulated noisy data from numerical breast phantoms. Errors were less than 0.5% in the recovered SS and 10% in the AA.

30 December 2021 in Inverse Problems
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FLFelix Lucka
Felix Lucka
MPMailyn Pérez-Liva
Mailyn Pérez-Liva
BTBradley E Treeby
Bradley E Treeby
Ben CoxBen Cox
Ben Cox
Ultrasound tomography (UST) scanners allow quantitative images of the human breast’s acoustic properties to be derived with potential applications in screening, diagnosis and therapy planning. Time domain full waveform inversion (TD-FWI) is a promising UST image formation technique that fits the parameter fields of a wave physics model by gradient-based optimization. For high resolution 3D UST, it holds three key challenges: firstly, its central building block, the computation of the gradient for a single US measurement, has a restrictively large memory footprint. Secondly, this building block needs to be computed for each of the 103–104 measurements, resulting in a massive parallel computation usually performed on large computational clusters for days. Lastly, the structure of the underlying optimization problem may result in slow progression of the solver and convergence to a local minimum. In this work, we design and evaluate a comprehensive computational strategy to overcome these challenges: firstly, we exploit a gradient computation based on time reversal that dramatically reduces the memory footprint at the expense of one additional wave simulation per source. Secondly, we break the dependence on the number of measurements by using source encoding (SE) to compute stochastic gradient estimates. Also we describe a more accurate, TD-specific SE technique with a finer variance control and use a state-of-the-art stochastic LBFGS method. Lastly, we design an efficient TD multi-grid scheme together with preconditioning to speed up the convergence while avoiding local minima. All components are evaluated in extensive numerical proof-of-concept studies simulating a bowl-shaped 3D UST breast scanner prototype. Finally, we demonstrate that their combination allows us to obtain an accurate 442 × 442 × 222 voxel image with a resolution of 0.5 mm using Matlab on a single GPU within 24 h.

6 February 2018 in Nature Biomedical Engineering
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JPJean Provost
Jean Provost
AGAnikitos Garofalakis
Anikitos Garofalakis
JSJoevin Sourdon
Joevin Sourdon
DBDamien Bouda
Damien Bouda
BBBéatrice Berthon
Béatrice Berthon
BTBertrand Tavitian
Bertrand Tavitian
Positron emission tomography–computed tomography (PET–CT) is the most sensitive molecular imaging modality, but it does not easily allow for rapid temporal acquisition. Ultrafast ultrasound imaging (UUI)—a recently introduced technology based on ultrasonic holography—leverages frame rates of up to several thousand images per second to quantitatively map, at high resolution, haemodynamic, biomechanical, electrophysiological and structural parameters. Here, we describe a pre-clinical scanner that registers PET–CT and UUI volumes acquired simultaneously and offers multiple combinations for imaging. We demonstrate that PET–CT–UUI allows for simultaneous images of the vasculature and metabolism during tumour growth in mice and rats, as well as for synchronized multi-modal cardiac cine-loops. Combined anatomical, functional and molecular imaging with PET–CT–UUI represents a high-performance and clinically translatable technology for biomedical research.

22 May 2015 in IEEE Transactions on Medical Imaging
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Journal Article
Closed access
JCJacobo Cal-Gonzalez
Jacobo Cal-Gonzalez
MPMailyn Pérez-Liva
Mailyn Pérez-Liva
JHJOAQUIN L. HERRAIZ
JOAQUIN L. HERRAIZ
JVJuan J. Vaquero
Juan J. Vaquero
DMDesco Menéndez Manuel
Desco Menéndez Manuel
JUJose MANUEL Udias
Jose MANUEL Udias
Positron range (PR) is a significant factor that limits PET image resolution, especially with some radionuclides currently used in clinical and preclinical studies such as 82 Rb, 124 I and 68 Ga. The use of an accurate model of the PR in the image reconstruction may minimize its impact on the image quality. Nevertheless, PR distributions are difficult to model, as they may be different at each voxel and direction, depending on the materials that the positron flies through. Several approximated methods have been proposed, considering only one or several propagating media without taking into account boundaries effects. In some regions, like lungs or trachea, these methods may not be accurate enough and yield artifacts. In this work, we present an efficient method to accurately incorporate spatially-variant PR corrections. The method is based on pre-computing voxel-dependent PR kernels using a CT or a manually segmented image, and a model of the dependence of the PR on each material derived from Monte Carlo simulations. The images are convoluted with these kernels in the forward-projection step of the iterative reconstruction algorithm. This implementation of the algorithm adds a modest overhead to the overall reconstruction time and it obtains artifact-free PR-corrected images, even when the activity is concentrated at tissue boundaries with extreme changes of density. We verified the method with the preclinical Argus PET/CT scanner, but it can be also applied to other scanners and improve the image quality in clinical PET studies using isotopes with large PR.

28 June 2023 in Nature Communications
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TYThulaciga Yoganathan
Thulaciga Yoganathan
MPMailyn Pérez-Liva
Mailyn Pérez-Liva
DBDaniel Balvay
Daniel Balvay
MGMorgane Le Gall
Morgane Le Gall
ALAlice Lallemand
Alice Lallemand
BTBertrand Tavitian
Bertrand Tavitian
Takotsubo cardiomyopathy is a stress-induced cardiovascular disease with symptoms comparable to those of an acute coronary syndrome but without coronary obstruction. Takotsubo was initially considered spontaneously reversible, but epidemiological studies revealed significant long-term morbidity and mortality, the reason for which is unknown. Here, we show in a female rodent model that a single pharmacological challenge creates a stress-induced cardiomyopathy similar to Takotsubo. The acute response involves changes in blood and tissue biomarkers and in cardiac in vivo imaging acquired with ultrasound, magnetic resonance and positron emission tomography. Longitudinal follow up using in vivo imaging, histochemistry, protein and proteomics analyses evidences a continued metabolic reprogramming of the heart towards metabolic malfunction, eventually leading to irreversible damage in cardiac function and structure. The results combat the supposed reversibility of Takotsubo, point to dysregulation of glucose metabolic pathways as a main cause of long-term cardiac disease and support early therapeutic management of Takotsubo.

1 April 2020 in Ultrasonics
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Journal Article
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MPMailyn Pérez-Liva
Mailyn Pérez-Liva
JUJosé Manuel Udías
José Manuel Udías
JCJorge Camacho
Jorge Camacho
EMElena Merčep
Elena Merčep
XDXosé Luís Deán-Ben
Xosé Luís Deán-Ben
JHJoaquín L. Herraiz
Joaquín L. Herraiz