Francisco Maria Galamba Ferrari Calisto

Prof. Dr. Francisco Maria Galamba Ferrari Calisto

orcid

Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 March 2022 in Artificial Intelligence in Medicine
Verified
Journal Article
Open access
FCFrancisco Maria Galamba Ferrari Calisto
Francisco Maria Galamba Ferrari Calisto
CSCarlos Santiago
Carlos Santiago
NNNuno Jardim Nunes
Nuno Jardim Nunes
JNJacinto C. Nascimento
Jacinto C. Nascimento
In this paper, we developed BreastScreening-AI within two scenarios for the classification of multimodal beast images: (1) Clinician-Only; and (2) Clinician-AI. The novelty relies on the introduction of a deep learning method into a real clinical workflow for medical imaging diagnosis. We attempt to address three high-level goals in the two above scenarios. Concretely, how clinicians: i) accept and interact with these systems, revealing whether are explanations and functionalities required; ii) are receptive to the introduction of AI-assisted systems, by providing benefits from mitigating the clinical error; and iii) are affected by the AI assistance. We conduct an extensive evaluation embracing the following experimental stages: (a) patient selection with different severities, (b) qualitative and quantitative analysis for the chosen patients under the two different scenarios. We address the high-level goals through a real-world case study of 45 clinicians from nine institutions. We compare the diagnostic and observe the superiority of the Clinician-AI scenario, as we obtained a decrease of 27% for False-Positives and 4% for False-Negatives. Through an extensive experimental study, we conclude that the proposed design techniques positively impact the expectations and perceptive satisfaction of 91% clinicians, while decreasing the time-to-diagnose by 3 min per patient.

1 September 2022 in International Journal of Human-Computer Studies
Verified
Journal Article
Closed access
FCFrancisco Maria Galamba Ferrari Calisto
Francisco Maria Galamba Ferrari Calisto
NNNuno Jardim Nunes
Nuno Jardim Nunes
JNJacinto C. Nascimento
Jacinto C. Nascimento

1 June 2021 in International Journal of Human-Computer Studies
Verified
Journal Article
Closed access
FCFrancisco Maria Galamba Ferrari Calisto
Francisco Maria Galamba Ferrari Calisto
CSCarlos Santiago
Carlos Santiago
NNNuno Jardim Nunes
Nuno Jardim Nunes
JNJacinto C. Nascimento
Jacinto C. Nascimento

25 January 2025 in International Journal of Human-Computer Studies
Verified
Journal Article
Open access
FCFrancisco Maria Galamba Ferrari Calisto
Francisco Maria Galamba Ferrari Calisto
JAJoão Maria Abrantes
João Maria Abrantes
CSCarlos Santiago
Carlos Santiago
NNNuno J. Nunes
Nuno J. Nunes
JNJacinto C. Nascimento
Jacinto C. Nascimento

17 October 2017
Verified
Conference Paper
Open access
FCFrancisco Maria Galamba Ferrari Calisto
Francisco Maria Galamba Ferrari Calisto
AFAlfredo Ferreira
Alfredo Ferreira
JNJacinto C. Nascimento
Jacinto C. Nascimento
DGDaniel Gonçalves
Daniel Gonçalves

24 July 2026 in SSRN Electronic Journal
Verified
Preprint
Open access
ABArezoo Borji
Arezoo Borji
GKGernot Kronreif
Gernot Kronreif
BABernhard Angermayr
Bernhard Angermayr
FCFrancisco Maria Galamba Ferrari Calisto
Francisco Maria Galamba Ferrari Calisto
AAAli Abbasian Ardakani
Ali Abbasian Ardakani
SHSepideh Hatamikia
Sepideh Hatamikia
Breast cancer is a highly heterogeneous disease with diverse molecular profiles. Recent AI models have attempted to predict PAM50 subtype, as a standard for classifying breast cancer into intrinsic subtypes, from histopathology images, most depend on random patch sampling that introduces redundancy and restricts the model performance.In this study, we introduce a novel optimization-driven deep learning framework that aims to reduce reliance on costly molecular assays by directly predicting PAM50 subtypes from H&E-stained whole-slide images (WSIs). Our method jointly optimizes patch informativeness, spatial diversity, uncertainty, and patch count by combining the non-dominated sorting genetic algorithm II (NSGA-II) with Monte Carlo dropout-based uncertainty estimation. The proposed method can identify a small but highly informative patch subset for classification. We used a ResNet18 backbone for feature extraction and a fully connected head for classification. For evaluation, we used the internal TCGA-BRCA dataset as the training cohort and the external CPTAC-BRCA dataset as the test cohort. On the internal dataset, an F1-score of 0.8964 and an AUC of 0.9865 using 627 WSIs from the TCGA-BRCA cohort were achieved. The performance of the proposed approach on the external validation dataset showed an F1-score of 0.7995 and an AUC of 0.9523.These findings indicate that the proposed optimization-guided, uncertainty-aware patch selection can achieve high performance and improve the computational efficiency of histopathology-based PAM50 classification compared to existing methods, suggesting a scalable imaging-based replacement that has the potential to support clinical decision-making.