Simone Savino

Dr. Simone Savino

Gent University
orcid

Research Focus & Metrics

Academic Career Length

12Years (2015-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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23 December 2016 in Journal of the American Chemical Society
Verified
Journal Article
Open access
MFMaximilian J. L. J. Fürst
Maximilian J. L. J. Fürst
SSSimone Savino
Simone Savino
HDHanna M. Dudek
Hanna M. Dudek
JCJ. Rúben Gómez Castellanos
J. Rúben Gómez Castellanos
CSCora Gutiérrez de Souza
Cora Gutiérrez de Souza
AMAndrea Mattevi
Andrea Mattevi
Regio- and stereoselective Baeyer–Villiger oxidations are difficult to achieve by classical chemical means, particularly when large, functionalized molecules are to be converted. Biocatalysis using flavin-containing Baeyer–Villiger monooxygenases (BVMOs) is a well-established tool to address these challenges, but known BVMOs have shortcomings in either stability or substrate selectivity. We characterized a novel BVMO from the thermophilic fungus Thermothelomyces thermophila, determined its three-dimensional structure, and demonstrated its use as a promising biocatalyst. This fungal enzyme displays excellent enantioselectivity, acts on various ketones, and is particularly active on polycyclic molecules. Most notably we observed that the enzyme can perform oxidations on both the A and D ring when converting steroids. These functional properties can be linked to unique structural features, which identify enzymes acting on bulky substrates as a distinct subgroup of the BVMO class.

1 November 2021 in Biotechnology Advances
Verified
Journal Article
Open access
SSSimone Savino
Simone Savino
Marco FraaijeMarco Fraaije
Marco Fraaije
Carbohydrates are widely abundant molecules present in a variety of forms. For their biosynthesis and modification, nature has evolved a plethora of carbohydrate-acting enzymes. Many of these enzymes are of particular interest for biotechnological applications, where they can be used as biocatalysts or biosensors. Among the enzymes catalysing conversions of carbohydrates are the carbohydrate oxidases. These oxidative enzymes belong to different structural families and use different cofactors to perform the oxidation reaction of CH-OH bonds in carbohydrates. The variety of carbohydrate oxidases available in nature reflects their specificity towards different sugars and selectivity of the oxidation site. Thanks to their properties, carbohydrate oxidases have received a lot of attention in basic and applied research, such that nowadays their role in biotechnological processes is of paramount importance. In this review we provide an overview of the available knowledge concerning the known carbohydrate oxidases. The oxidases are first classified according to their structural features. After a description on their mechanism of action, substrate acceptance and characterisation, we report on the engineering of the different carbohydrate oxidases to enhance their employment in biocatalysis and biotechnology. In the last part of the review we highlight some practical applications for which such enzymes have been exploited.

23 November 2022 in Nature Communications
Verified
Journal Article
Open access
PDF file
YGYiming Guo
Yiming Guo
LALaura Alvigini
Laura Alvigini
MTMilos Trajkovic
Milos Trajkovic
LALur Alonso-Cotchico
Lur Alonso-Cotchico
EMEmanuele Monza
Emanuele Monza
Marco FraaijeMarco Fraaije
Marco Fraaije
Various 4-alkylphenols can be easily obtained through reductive catalytic fractionation of lignocellulosic biomass. Selective dehydrogenation of 4-n-propylguaiacol results in the formation of isoeugenol, a valuable flavor and fragrance molecule and versatile precursor compound. Here we present the engineering of a bacterial eugenol oxidase to catalyze this reaction. Five mutations, identified from computational predictions, are first introduced to render the enzyme more thermostable. Other mutations are then added and analyzed to enhance chemoselectivity and activity. Structural insight demonstrates that the slow catalytic activity of an otherwise promising enzyme variant is due the formation of a slowly-decaying covalent substrate-flavin cofactor adduct that can be remedied by targeted residue changes. The final engineered variant comprises eight mutations, is thermostable, displays good activity and acts as a highly chemoselective 4-n-propylguaiacol oxidase. We lastly use our engineered biocatalyst in an illustrative preparative reaction at gram-scale. Our findings show that a natural enzyme can be redesigned into a tailored biocatalyst capable of valorizing lignin-based monophenols.

6 November 2018 in Biochemistry
Verified
Journal Article
Closed access
FFFilippo Fiorentini
Filippo Fiorentini
AHAnna-Maria Hatzl
Anna-Maria Hatzl
Sandy SchmidtSandy Schmidt
Sandy Schmidt
SSSimone Savino
Simone Savino
AGAnton Glieder
Anton Glieder
AMAndrea Mattevi
Andrea Mattevi

25 November 2019 in Nature Catalysis
Verified
Journal Article
Closed access
PDF file
SSSimone Savino
Simone Savino
ABAnnika J. E. Borg
Annika J. E. Borg
ADAlexander Dennig
Alexander Dennig
MPMartin Pfeiffer
Martin Pfeiffer
FGFrancesca De Giorgi
Francesca De Giorgi
BNBernd Nidetzky
Bernd Nidetzky

4 January 2019 in Applied Microbiology and Biotechnology
Verified
Journal Article
Closed access
PDF file
NLNikola Loncar
Nikola Loncar
FFFilippo Fiorentini
Filippo Fiorentini
GBGautier Bailleul
Gautier Bailleul
SSSimone Savino
Simone Savino
ERElvira Romero
Elvira Romero
Marco FraaijeMarco Fraaije
Marco Fraaije