Denis Davydov

Dr. Denis Davydov

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Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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5 September 2022 in Diversity
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DDDenis Davydov
Denis Davydov
AVAnna Vilnet
Anna Vilnet
Cyanobacteria are crucial components of biological soil crusts of polar landscapes and carry out many functions in subaerial environments. Simple untapered filamentous cyanobacteria are typically in the terrestrial biotopes. They appear to be a group with an abundance of cryptic taxa. We isolated 23 strains of cyanobacteria from the different habitats of the Arctic and temperate zone, from 10 locations in order to characterize their morphological and genotypic diversity. Phylogenetic analyses were conducted on the 16S and 16S–23S ITS rRNA gene regions using Bayesian inference and maximum likelihood. A morphological comparison of the isolated strains with similar known species, as well as its phylogenetic analyses, revealed that they belong to three species of the genus Phormidesmis (P. nigrescens, P. pristley, and P. communis)—and to the previously unknown genus of Leptolyngbyaceae. Using an integrative approach, we provide here a description of a new taxon Apatinema gen. nov.


6 September 2019 in Folia Cryptogamica Estonica
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AMAlexey V. Melekhin
Alexey V. Melekhin
DDDenis Davydov
Denis Davydov
EBEvgeny A. Borovichev
Evgeny A. Borovichev
SSSergei Shalygin
Sergei Shalygin
NKNadezhda Konstantinova
Nadezhda Konstantinova
Here we describe Cryptogamic Russian Information System (CRIS), a web service cataloguing the biodiversity of cryptogams: cyanobacteria, fungi (including lichens), and bryophytes. CRIS incorporates a wide spectrum of data types, allowing for greater ease of use. It is possible to print the labels for herbarium collections, to input literature references, media files, etc., using CRIS which has a flexible interface and specific technical abilities. Currently, CRIS contains ~ 90,000 herbarium records, including 67,861 records of bryophytes, 12,486 records of lichens and 3,800 records of cyanobacteria. Data analysis of the different taxonomic groups is provided below. Perspectives and directions for the future development of CRIS are discussed.

11 May 2020 in Phytotaxa
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DDDenis Davydov
Denis Davydov
SSSergei Shalygin
Sergei Shalygin
AVAnna Vilnet
Anna Vilnet
A cyanobacterial strain isolated from the Svalbard archipelago was studied using morphological, ecological, and molecular approaches. The morphology of natural populations fit well the description of the Leptolyngbya s.l. however, in culture, they formed specific nodules that prevented affiliation to this genus. Further phylogenetic analyses including the 16S rRNA gene and 16S-23S ITS region revealed that the strain corresponds to the genus Nodosilinea. Based on this total evidence approach, we provide here a description of the new taxon Nodosilinea svalbardensis sp. nov.

20 July 2023 in Toxins
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VGViktor Alexandrovich Gabyshev
Viktor Alexandrovich Gabyshev
SSSergey Sidelev
Sergey Sidelev
ECEkaterina Chernova
Ekaterina Chernova
AVAnna Vilnet
Anna Vilnet
DDDenis Davydov
Denis Davydov
IVIvan V. Voronov
Ivan V. Voronov
This study aimed to test the hypothesis of the year-round presence of toxigenic Microcystis and cyanotoxins in the water and ice of the shallow eutrophic Lake Ytyk-Kyuyol located in the continuous permafrost zone. Three independent approaches—mass-spectrometry, molecular methods and light microscopy—were applied in the study. The cyanobacterial biomass ranged from 1.0 × 10−4 to 4.8 mg L−1. Microcystis flos-aquae and M. aeruginosa were the dominant morphospecies in plankton throughout the observation. In environmental DNA, the presence of M. aeruginosa was supported and mcy gene regions responsible for microcystin biosynthesis were detected through a BLAST (Basic Local Alignment Search Tool) search and phylogenetic estimation based on newly obtained 16S rRNA, 16S–23S ITS rRNA, mcyA and mcyE nucleotide sequences. The intracellular microcystin concentration ranged from <0.1 to 803 ng L−1, and the microcystin quota in the Microcystis biomass was extremely low. For the first time, it was shown that Microcystis cells containing mcy genes and microcystins presented permanently in the water column, both during the ice-free period and under ice, as well as inside thick ice covers within 7 months of severe winter. We hypothesized that minor pelagic and ice populations of Microcystis could participate in increasing cell density in the spring. However, further studies are needed to confirm the viability of the overwintering Microcystis colonies in the water and inside the ice of Lake Ytyk-Kyuyol.