Chao Yan

Dr. Chao Yan

orcid

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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31 December 2021 in Animals
Verified
Journal Article
Open access
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SCSiyu Chen
Siyu Chen
SLShuyan Luo
Shuyan Luo
CYChao Yan
Chao Yan
In the past few decades, farm animal health and welfare have been paid increasing concern worldwide. Farm animal health and welfare are generally assessed by the measurements of physical health, immune response, behavior, and physiological indicators. The gut microbiota has been reported to have a great influence on host phenotypes, possibly via the immune processes, neural functions, and endocrine pathways, thereby influencing host phenotypes. However, there are few reviews regarding farm animals’ health and welfare status concerning the gut microbiota. In this point of view, (1) we reviewed recent studies showing that gut microbiota (higher alpha diversity, beneficial composition, and positive functions) effectively influenced health characteristics, immunity, behaviors, and stress response in farm animals (such as pigs, chickens, and cows), which would provide a novel approach to measure and evaluate the health status and welfare of farm animals. In addition, fecal microbiota transplantation (FMT) as one of the methods can modulate the recipient individual’s gut microbiota to realize the expected phenotype. Further, (2) we highlighted the application of FMT on the improvement of the production performance, the reduction in disease and abnormal behavior, as well as the attenuation of stress in farm animals. It is concluded that the gut microbiota can be scientifically used to assess and improve the welfare of farm animals. Moreover, FMT may be a helpful strategy to reduce abnormal behavior and improve stress adaption, as well as the treatment of disease for farm animals. This review suggests that gut microbiota is a promising field to evaluate and improve animal welfare.

Verified
Journal Article
Open access
PDF file
YLYanwen Liu
Yanwen Liu
YYYilong Yao
Yilong Yao
YZYongsheng Zhang
Yongsheng Zhang
CYChao Yan
Chao Yan
MYMingsha Yang
Mingsha Yang
ZTZhonglin Tang
Zhonglin Tang
Skeletal muscle, as a regenerative organization, plays a vital role in physiological characteristics and homeostasis. However, the regulation mechanism of skeletal muscle regeneration is not entirely clear. miRNAs, as one of the regulatory factors, exert profound effects on regulating skeletal muscle regeneration and myogenesis. This study aimed to discover the regulatory function of important miRNA miR-200c-5p in skeletal muscle regeneration. In our study, miR-200c-5p increased at the early stage and peaked at first day during mouse skeletal muscle regeneration, which was also highly expressed in skeletal muscle of mouse tissue profile. Further, overexpression of miR-200c-5p promoted migration and inhibited differentiation of C2C12 myoblast, whereas inhibition of miR-200c-5p had the opposite effect. Bioinformatic analysis predicted that Adamts5 has potential binding sites for miR-200c-5p at 3’UTR region. Dual-luciferase and RIP assays further proved that Adamts5 is a target gene of miR-200c-5p. The expression patterns of miR-200c-5p and Adamts5 were opposite during the skeletal muscle regeneration. Moreover, miR-200c-5p can rescue the effects of Adamts5 in the C2C12 myoblast. In conclusion, miR-200c-5p might play a considerable function during skeletal muscle regeneration and myogenesis. These findings will provide a promising gene for promoting muscle health and candidate therapeutic target for skeletal muscle repair.

21 February 2024 in Genes
Verified
Journal Article
Open access
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DFDanyang Fan
Danyang Fan
YYYilong Yao
Yilong Yao
YLYanwen Liu
Yanwen Liu
CYChao Yan
Chao Yan
FLFanqinyu Li
Fanqinyu Li
ZTZhonglin Tang
Zhonglin Tang
Skeletal muscle plays critical roles in providing a protein source and contributing to meat production. It is well known that microRNAs (miRNAs) exert important effects on various biological processes in muscle, including cell fate determination, muscle fiber morphology, and structure development. However, the role of miRNA in skeletal muscle development remains incompletely understood. In this study, we observed a critical miRNA, miR-24-3p, which exhibited higher expression levels in Tongcheng (obese-type) pigs compared to Landrace (lean-type) pigs. Furthermore, we found that miR-24-3p was highly expressed in the dorsal muscle of pigs and the quadriceps muscle of mice. Functionally, miR-24-3p was found to inhibit proliferation and promote differentiation in muscle cells. Additionally, miR-24-3p was shown to facilitate the conversion of slow muscle fibers to fast muscle fibers and influence the expression of GLUT4, a glucose transporter. Moreover, in a mouse model of skeletal muscle injury, we demonstrated that overexpression of miR-24-3p promoted rapid myogenesis and contributed to skeletal muscle regeneration. Furthermore, miR-24-3p was found to regulate the expression of target genes, including Nek4, Pim1, Nlk, Pskh1, and Mapk14. Collectively, our findings provide evidence that miR-24-3p plays a regulatory role in myogenesis and fiber type conversion. These findings contribute to our understanding of human muscle health and have implications for improving meat production traits in livestock.

2 January 2024 in Genes
Verified
Journal Article
Open access
PDF file
FLFanqinyu Li
Fanqinyu Li
CYChao Yan
Chao Yan
YYYilong Yao
Yilong Yao
YYYalan Yang
Yalan Yang
YLYanwen Liu
Yanwen Liu
ZTZhonglin Tang
Zhonglin Tang
Skeletal muscle development remarkably affects meat production and growth rate, regulated by complex regulatory mechanisms in pigs. Specific AT sequence-binding protein 2 (SATB2) is a classic transcription factor and chromatin organizer, which holds a profound effect in the regulation of chromatin remodeling. However, the regulation role of SATB2 concerning skeletal muscle cell fate through chromatin remodeling in pigs remains largely unknown. Here, we observed that SATB2 was expressed higher in the lean-type compared to the obese-type pigs, which also enriched the pathways of skeletal muscle development, chromatin organization, and histone modification. Functionally, knockdown SATB2 led to decreases in the proliferation and migration markers at the mRNA and protein expression levels, respectively, while overexpression SATB2 had the opposite effects. Further, we found histone deacetylase 4 (HDAC4) was a key downstream target gene of SATB2 related to chromatin remodeling. The binding relationship between SATB2 and HDAC4 was confirmed by a dual-luciferase reporter system and ChIP-qPCR analysis. Besides, we revealed that HDAC4 promoted the skeletal muscle cell proliferation and migration at the mRNA and protein expression levels, respectively. In conclusion, our study indicates that transcription factor SATB2 binding to HDAC4 positively contributes to skeletal muscle cell proliferation and migration, which might mediate the chromatin remodeling to influence myogenesis in pigs. This study develops a novel insight into understanding the molecular regulatory mechanism of myogenesis, and provides a promising gene for genetic breeding in pigs.

15 January 2023 in Agriculture
Verified
Journal Article
Open access
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YZYe Zhou
Ye Zhou
CYChao Yan
Chao Yan
DCDi Chen
Di Chen
CZChengde Zhang
Chengde Zhang
XZXingbo Zhao
Xingbo Zhao
The combination of planting and breeding, an agricultural production system, makes full use of land, ecological space and time, increasing the utilization rate and yield of both plant and animal production. This experiment aimed to explore the effects of the grape-duck farming system by analyzing behavior, meat quality, and fecal microbiota of ducks and the soil microbiota. The results differed significantly on the expressions of positive behaviors between the breeding group and the combination of planting and breeding group, including actions of foraging, feeding and walking (p < 0.05), while the free-range group showed more stereotyped behavior of no apparent purpose or significance. In terms of meat quality, the yellow value b* of the combination group was significantly higher than that of the free-range group (p < 0.05). The drip loss rate of the planting and breeding group was 1.80%, and the drip loss rate of the combination group was 3.80%, with a significant difference (p < 0.05). The combination of planting and rearing increased the alpha diversity of soil microbiota (p < 0.05), but it had no obvious effect on the fecal microbiota of ducks. PCoA showed that soil microorganisms and fecal microbiota are obviously separated and clustered. In conclusion, the combination production mode of “grape-duck” had a positive effect on duck behavior, meat quality, and soil microorganisms, however, it changed virtually nothing in duck production performance and fecal microbiota.

7 March 2022 in Animals
Verified
Journal Article
Open access
PDF file
CYChao Yan
Chao Yan
WLwen liu
wen liu
JXJinlong Xiao
Jinlong Xiao
HXHai Xiang
Hai Xiang
JWJikun Wang
Jikun Wang
XZXingbo Zhao
Xingbo Zhao
In this study, we hypothesized that complex early-life environments enhance the learning ability and the hippocampal plasticity when the individual is faced with future life challenges. Chicks were divided into a barren environment group (BG), a litter materials group (LG), and a perches and litter materials group (PLG) until 31 days of age, and then their learning abilities were tested following further rearing in barren environments for 22 days. In response to the future life challenge, the learning ability showed no differences among the three groups. In the hippocampal KEGG pathways, the LG chicks showed the downregulation of neural-related genes neuronal growth regulator 1 (NEGR1) and neurexins (NRXN1) in the cell adhesion molecules pathway compared to the BG (p < 0.05). Immune-related genes TLR2 in Malaria and Legionellosis and IL-18 and IL18R1 in the TNF signaling pathway were upregulated in the LG compared to in the BG (p < 0.05). Compared to the BG, the PLG displayed upregulated TLR2A in Malaria (p < 0.05). The PLG showed upregulated neural-related gene, i.e., neuronal acetylcholine receptor subunit alpha-7-like (CHRNA8) in the nicotine addiction pathway and secretagogin (SCGN) gene expression, as compared to the LG (p < 0.05). In conclusion, early-life environmental complexities had limited effects on the learning ability in response to a future life challenge. Early-life perches and litter materials can improve neural- and immune-related gene expression and functional pathways in the hippocampus of chicks.