Thomas Summers

Dr. Thomas Summers

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Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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5 April 2022 in Physical Chemistry Chemical Physics
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Journal Article
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RORavi D. O’brien
Ravi D. O’brien
TSThomas Summers
Thomas Summers
DKDanil S. Kaliakin
Danil S. Kaliakin
DCDavid C. Cantu
David C. Cantu
The relative binding energies of lanthanide–EDTA complexes, at varying solution pH, were predicted from electronic structure calculations using the solution structures of Ln–EDTA complexes resolved withab initiomolecular dynamics simulations.

22 November 2019 in Journal of Chemical Information and Modeling
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Journal Article
Closed access
TSThomas Summers
Thomas Summers
BDBaty P. Daniel
Baty P. Daniel
QCQianyi Cheng
Qianyi Cheng
NDNathan John DeYonker
Nathan John DeYonker

18 November 2024 in JACS Au
Verified
Journal Article
Open access
TSThomas Summers
Thomas Summers
MTMichael G. Taylor
Michael G. Taylor
LALogan J. Augustine
Logan J. Augustine
JJJan Janssen
Jan Janssen
DPDanny Perez
Danny Perez
PYPing Yang
Ping Yang
The lanthanide elements are crucial components in numerous technologies, yet their industrial production through liquid-liquid extraction continues to be economically and environmentally costly due to the challenge of separating elements with similar physicochemical properties. While computational ligand screening has shown promise toward discovering efficient extractants, the complexity of constructing chemically sensible 3D structures (often by hand), coupled with the high cost of quantum chemistry calculations, often limits exploration of the vast ligand chemical and conformational space in favor of local exploration around known chemistries. Moreover, metal complexes can have many stable configurations whose differences in energies exceed the small energy differences that determine the extractant selectivity for certain lanthanides. Because of this difference, incorrect selectivity predictions can be made if the lowest energy coordination complex is not identified and modeled. To address this issue, we present a high-throughput computational workflow that automates the construction and quantum mechanical modeling of 3D lanthanide-extractant complexes. This approach allows for an unbiased search of distinct configurational and compositional variations for each metal, enabling accurate predictions of their solution structures and lanthanide selectivity. As showcased by three extractants from diverse chemical categories-a crown ether, a phenanthroline monocarboxamide, and a malonamide-it is found that sampling the lanthanide-ligand configuration space is critical to correctly predicting the metal coordination environment and experimental lanthanide selectivity trends.

5 April 2024 in Physical Chemistry Chemical Physics
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Journal Article
Closed access
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DADonatus A. Agbaglo
Donatus A. Agbaglo
TSThomas Summers
Thomas Summers
QCQianyi Cheng
Qianyi Cheng
NDNathan John DeYonker
Nathan John DeYonker
Most QM-cluster models of enzymes are constructed based on X-ray crystal structures, which limits comparison to in vivo structure and mechanism. This work introduces an MD to QM-cluster model workflow.

20 March 2023 in Inorganic Chemistry
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Journal Article
Closed access
TSThomas Summers
Thomas Summers
JSJosiane A. Sobrinho
Josiane A. Sobrinho
Ana de Bettencourt-DiasAna de Bettencourt-Dias
Ana de Bettencourt-Dias
SKShelly D. Kelly
Shelly D. Kelly
JFJohn L. Fulton
John L. Fulton
DCDavid C. Cantu
David C. Cantu

8 April 2024 in European Journal of Inorganic Chemistry
Verified
Journal Article
Closed access
GLGerra L. Licup
Gerra L. Licup
TSThomas Summers
Thomas Summers
JSJosiane A. Sobrinho
Josiane A. Sobrinho
Ana de Bettencourt-DiasAna de Bettencourt-Dias
Ana de Bettencourt-Dias
DCDavid C. Cantu
David C. Cantu