Vassilis L. Tzounakas

Dr. Vassilis L. Tzounakas

Department of Biology, School of Science, National and Kapodistrian University of Athens, Athens, Greece

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
27 June 2023 in Metabolites
Verified
Journal Article
Open access
PDF file
Angelo D'AlessandroAngelo D'Alessandro
Angelo D'Alessandro
Alkmini AnastasiadiAlkmini Anastasiadi
Alkmini Anastasiadi
VTVassilis L. Tzounakas
Vassilis L. Tzounakas
TNTravis Nemkov
Travis Nemkov
JRJulie A. Reisz
Julie A. Reisz
MBMichael Paul Busch
Michael Paul Busch
Red blood cells (RBC) are the most abundant cell in the human body, with a central role in oxygen transport and its delivery to tissues. However, omics technologies recently revealed the unanticipated complexity of the RBC proteome and metabolome, paving the way for a reinterpretation of the mechanisms by which RBC metabolism regulates systems biology beyond oxygen transport. The new data and analytical tools also informed the dissection of the changes that RBCs undergo during refrigerated storage under blood bank conditions, a logistic necessity that makes >100 million units available for life-saving transfusions every year worldwide. In this narrative review, we summarize the last decade of advances in the field of RBC metabolism in vivo and in the blood bank in vitro, a narrative largely influenced by the authors’ own journeys in this field. We hope that this review will stimulate further research in this interesting and medically important area or, at least, serve as a testament to our fascination with this simple, yet complex, cell.

25 January 2024 in Protein & Cell
Verified
Journal Article
Open access
PDF file
Alkmini AnastasiadiAlkmini Anastasiadi
Alkmini Anastasiadi
VAVasiliki-Zoi Arvaniti
Vasiliki-Zoi Arvaniti
KHKrystalyn E Hudson
Krystalyn E Hudson
Anastasios G. KriebardisAnastasios G. Kriebardis
Anastasios G. Kriebardis
Constantinos STATHOPOULOSConstantinos STATHOPOULOS
Constantinos STATHOPOULOS
VTVassilis L. Tzounakas
Vassilis L. Tzounakas
Alkmini T Anastasiadi, Vasiliki-Zoi Arvaniti, Krystalyn E Hudson, Anastasios G Kriebardis, Constantinos Stathopoulos, Angelo D’Alessandro, Steven L Spitalnik, V

Verified
Journal Article
Open access
PDF file
ETEleni-Myrto Trifylli
Eleni-Myrto Trifylli
Anastasios G. KriebardisAnastasios G. Kriebardis
Anastasios G. Kriebardis
Evangelos KoustasEvangelos Koustas
Evangelos Koustas
NPNikolaos Papadopoulos
Nikolaos Papadopoulos
SVSofia Vasileiadi
Sofia Vasileiadi
MDMelanie Deutsch
Melanie Deutsch
Cholangiocarcinomas (CCAs) constitute a heterogeneous group of highly malignant epithelial tumors arising from the biliary tree. This cluster of malignant tumors includes three distinct entities, the intrahepatic, perihilar, and distal CCAs, which are characterized by different epidemiological and molecular backgrounds, as well as prognosis and therapeutic approaches. The higher incidence of CCA over the last decades, the late diagnostic time that contributes to a high mortality and poor prognosis, as well as its chemoresistance, intensified the efforts of the scientific community for the development of novel diagnostic tools and therapeutic approaches. Extracellular vesicles (EVs) comprise highly heterogenic, multi-sized, membrane-enclosed nanostructures that are secreted by a large variety of cells via different routes of biogenesis. Their role in intercellular communication via their cargo that potentially contributes to disease development and progression, as well as their prospect as diagnostic biomarkers and therapeutic tools, has become the focus of interest of several current studies for several diseases, including CCA. The aim of this review is to give a rundown of the current knowledge regarding the emerging role of EVs in cholangiocarcinogenesis and their future perspectives as diagnostic and therapeutic tools.

Verified
Journal Article
Open access
PDF file
VTVassilis L. Tzounakas
Vassilis L. Tzounakas
Alkmini AnastasiadiAlkmini Anastasiadi
Alkmini Anastasiadi
MDMonika Dzieciatkowska
Monika Dzieciatkowska
DKDimitrios G. Karadimas
Dimitrios G. Karadimas
KSKonstantinos Stamoulis
Konstantinos Stamoulis
MAMarianna Antonelou
Marianna Antonelou
Genetic characteristics of blood donors may impact the storability of blood products. Despite higher basal stress, red blood cells (RBCs) from eligible donors that are heterozygous for beta-thalassemia traits (βThal+) possess a differential nitrogen-related metabolism, and cope better with storage stress compared to the control. Nevertheless, not much is known about how storage impacts the proteome of membrane and extracellular vesicles (EVs) in βThal+. For this purpose, RBC units from twelve βThal+ donors were studied through proteomics, immunoblotting, electron microscopy, and functional ELISA assays, versus units from sex- and aged-matched controls. βThal+ RBCs exhibited less irreversible shape modifications. Their membrane proteome was characterized by different levels of structural, lipid raft, transport, chaperoning, redox, and enzyme components. The most prominent findings include the upregulation of myosin proteoforms, arginase-1, heat shock proteins, and protein kinases, but the downregulation of nitrogen-related transporters. The unique membrane proteome was also mirrored, in part, to that of βThal+ EVs. Network analysis revealed interesting connections of membrane vesiculation with storage and stress hemolysis, along with proteome control modulators of the RBC membrane. Our findings, which are in line with the mild but consistent oxidative stress these cells experience in vivo, provide insight into the physiology and aging of stored βThal+ RBCs.

17 September 2021 in Membranes
Verified
Journal Article
Open access
PDF file
Alkmini AnastasiadiAlkmini Anastasiadi
Alkmini Anastasiadi
VTVassilis L. Tzounakas
Vassilis L. Tzounakas
VAVasiliki-Zoi Arvaniti
Vasiliki-Zoi Arvaniti
MDMonika Dzieciatkowska
Monika Dzieciatkowska
KSKonstantinos Stamoulis
Konstantinos Stamoulis
MAMarianna Antonelou
Marianna Antonelou
Proteasomes are multi-catalytic complexes with important roles in protein control. Their activity in stored red blood cells (RBCs) is affected by both storage time and the donor’s characteristics. However, apart from their abundancy in the membrane proteome, not much is known about their topology, activity, and networking during the storage of RBCs from beta-thalassemia trait donors (βThal+). For this purpose, RBC units from fourteen βThal+ donors were fractionated and studied for proteasome activity distribution and interactome through fluorometric and correlation analyses against units of sex- and aged-matched controls. In all the samples examined, we observed a time-dependent translocation and/or activation of the proteasome in the membrane and a tight connection of activity with the oxidative burden of cells. Proteasomes were more active in the βThal+ membranes and supernatants, while the early storage networking of 20S core particles and activities showed a higher degree of connectivity with chaperones, calpains, and peroxiredoxins, which were nonetheless present in all interactomes. Moreover, the βThal+ interactomes were specially enriched in kinases, metabolic enzymes, and proteins differentially expressed in βThal+ membrane, including arginase-1, piezo-1, and phospholipid scramblase. Overall, it seems that βThal+ erythrocytes maintain a considerable “proteo-vigilance” during storage, which is closely connected to their distinct antioxidant dynamics and membrane protein profile.

Verified
Journal Article
Open access
PDF file
ETEleni-Myrto Trifylli
Eleni-Myrto Trifylli
Anastasios G. KriebardisAnastasios G. Kriebardis
Anastasios G. Kriebardis
Evangelos KoustasEvangelos Koustas
Evangelos Koustas
NPNikolaos Papadopoulos
Nikolaos Papadopoulos
SFSotirios P. Fortis
Sotirios P. Fortis
MDMelanie Deutsch
Melanie Deutsch
Pancreatic ductal adenocarcinoma (PDAC) is one of the deadliest malignancies worldwide, while it persists as the fourth most prevalent cause of cancer-related death in the United States of America. Although there are several novel therapeutic strategies for the approach of this intensely aggressive tumor, it remains a clinical challenge, as it is hard to identify in early stages, due to its asymptomatic course. A diagnosis is usually established when the disease is already in its late stages, while its chemoresistance constitutes an obstacle to the optimal management of this malignancy. The discovery of novel diagnostic and therapeutic tools is considered a necessity for this tumor, due to its low survival rates and treatment failures. One of the most extensively investigated potential diagnostic and therapeutic modalities is extracellular vesicles (EVs). These vesicles constitute nanosized double-lipid membraned particles that are characterized by a high heterogeneity that emerges from their distinct biogenesis route, their multi-variable sizes, and the particular cargoes that are embedded into these particles. Their pivotal role in cell-to-cell communication via their cargo and their implication in the pathophysiology of several diseases, including pancreatic cancer, opens new horizons in the management of this malignancy. Meanwhile, the interplay between pancreatic carcinogenesis and short non-coding RNA molecules (micro-RNAs or miRs) is in the spotlight of current studies, as they can have either a role as tumor suppressors or promoters. The deregulation of both of the aforementioned molecules leads to several aberrations in the function of pancreatic cells, leading to carcinogenesis. In this review, we will explore the role of extracellular vesicles and miRNAs in pancreatic cancer, as well as their potent utilization as diagnostic and therapeutic tools.