ALİ GÜNEŞ

Dr. ALİ GÜNEŞ

Applied Sciences Faculty, Software Development Department, Istanbul Aydın University, Istanbul, İstanbul, Turkey (Türkiye)
orcid

Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 March 2022 in BMC Medical Imaging
Verified
Journal Article
Open access
PDF file
UAUtku Can Aytaç
Utku Can Aytaç
ALİ GÜNEŞALİ GÜNEŞ
ALİ GÜNEŞ
NANaim Ajlouni
Naim Ajlouni
Background: AI for medical diagnosis has made a tremendous impact by applying convolutional neural networks (CNNs) to medical image classification and momentum plays an essential role in stochastic gradient optimization algorithms for accelerating or improving training convolutional neural networks. In traditional optimizers in CNNs, the momentum is usually weighted by a constant. However, tuning hyperparameters for momentum can be computationally complex. In this paper, we propose a novel adaptive momentum for fast and stable convergence. Method: Applying adaptive momentum rate proposes increasing or decreasing based on every epoch's error changes, and it eliminates the need for momentum hyperparameter optimization. We tested the proposed method with 3 different datasets: REMBRANDT Brain Cancer, NIH Chest X-ray, COVID-19 CT scan. We compared the performance of a novel adaptive momentum optimizer with Stochastic gradient descent (SGD) and other adaptive optimizers such as Adam and RMSprop. Results: Proposed method improves SGD performance by reducing classification error from 6.12 to 5.44%, and it achieved the lowest error and highest accuracy compared with other optimizers. To strengthen the outcomes of this study, we investigated the performance comparison for the state-of-the-art CNN architectures with adaptive momentum. The results shows that the proposed method achieved the highest with 95% compared to state-of-the-art CNN architectures while using the same dataset. The proposed method improves convergence performance by reducing classification error and achieves high accuracy compared with other optimizers.
1

27 August 2024 in Diagnostics
Verified
Journal Article
Open access
PDF file
AHAlparslan HORASAN
Alparslan HORASAN
ALİ GÜNEŞALİ GÜNEŞ
ALİ GÜNEŞ
Prostate cancer remains a leading cause of mortality among men globally, necessitating advancements in diagnostic methodologies to improve detection and treatment outcomes. Magnetic Resonance Imaging has emerged as a crucial technique for the detection of prostate cancer, with current research focusing on the integration of deep learning frameworks to refine this diagnostic process. This study employs a comprehensive approach using multiple deep learning models, including a three-dimensional (3D) Convolutional Neural Network, a Residual Network, and an Inception Network to enhance the accuracy and robustness of prostate cancer detection. By leveraging the complementary strengths of these models through an ensemble method and soft voting technique, the study aims to achieve superior diagnostic performance. The proposed methodology demonstrates state-of-the-art results, with the ensemble model achieving an overall accuracy of 91.3%, a sensitivity of 90.2%, a specificity of 92.1%, a precision of 89.8%, and an F1 score of 90.0% when applied to MRI images from the SPIE-AAPM-NCI PROSTATEx dataset. Evaluation of the models involved meticulous pre-processing, data augmentation, and the use of advanced deep-learning architectures to analyze the whole MRI slices and volumes. The findings highlight the potential of using an ensemble approach to significantly improve prostate cancer diagnostics, offering a robust and precise tool for clinical applications.
1

5 February 2024 in Tomography
Verified
Journal Article
Open access
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ŞAŞükran YAMAN ATCI
Şükran YAMAN ATCI
ALİ GÜNEŞALİ GÜNEŞ
ALİ GÜNEŞ
MZMetin Zontul
Metin Zontul
ZDZafer ASLAN (Prof. Dr.)
Zafer ASLAN (Prof. Dr.)
Diagnosing and screening for diabetic retinopathy is a well-known issue in the biomedical field. A component of computer-aided diagnosis that has advanced significantly over the past few years as a result of the development and effectiveness of deep learning is the use of medical imagery from a patient’s eye to identify the damage caused to blood vessels. Issues with unbalanced datasets, incorrect annotations, a lack of sample images, and improper performance evaluation measures have negatively impacted the performance of deep learning models. Using three benchmark datasets of diabetic retinopathy, we conducted a detailed comparison study comparing various state-of-the-art approaches to address the effect caused by class imbalance, with precision scores of 93%, 89%, 81%, 76%, and 96%, respectively, for normal, mild, moderate, severe, and DR phases. The analyses of the hybrid modeling, including CNN analysis and SHAP model derivation results, are compared at the end of the paper, and ideal hybrid modeling strategies for deep learning classification models for automated DR detection are identified.
1

17 May 2023 in Applied Sciences
Verified
Journal Article
Open access
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IYIlkay Yelmen
Ilkay Yelmen
ALİ GÜNEŞALİ GÜNEŞ
ALİ GÜNEŞ
MZMetin Zontul
Metin Zontul
With the recent growth of the Internet, the volume of data has also increased. In particular, the increase in the amount of unstructured data makes it difficult to manage data. Classification is also needed in order to be able to use the data for various purposes. Since it is difficult to manually classify the ever-increasing volume data for the purpose of various types of analysis and evaluation, automatic classification methods are needed. In addition, the performance of imbalanced and multi-class classification is a challenging task. As the number of classes increases, so does the number of decision boundaries a learning algorithm has to solve. Therefore, in this paper, an improvement model is proposed using WordNet lexical ontology and BERT to perform deeper learning on the features of text, thereby improving the classification effect of the model. It was observed that classification success increased when using WordNet 11 general lexicographer files based on synthesis sets, syntactic categories, and logical groupings. WordNet was used for feature dimension reduction. In experimental studies, word embedding methods were used without dimension reduction. Afterwards, Random Forest (RF), Support Vector Machine (SVM) and Multi-Layer Perceptron (MLP) algorithms were employed to perform classification. These studies were then repeated with dimension reduction performed by WordNet. In addition to the machine learning model, experiments were also conducted with the pretrained BERT model with and without WordNet. The experimental results showed that, on an unstructured, seven-class, imbalanced dataset, the highest accuracy value of 93.77% was obtained when using our proposed model.
1

24 January 2024 in Computation
Verified
Journal Article
Open access
PDF file
HTHayati TUTAR
Hayati TUTAR
ALİ GÜNEŞALİ GÜNEŞ
ALİ GÜNEŞ
MZMetin Zontul
Metin Zontul
ZDZafer ASLAN (Prof. Dr.)
Zafer ASLAN (Prof. Dr.)
With the rapid development in technology in recent years, the use of cameras and the production of video and image data have similarly increased. Therefore, there is a great need to develop and improve video surveillance techniques to their maximum extent, particularly in terms of their speed, performance, and resource utilization. It is challenging to accurately detect anomalies and increase the performance by minimizing false positives, especially in crowded and dynamic areas. Therefore, this study proposes a hybrid video anomaly detection model combining multiple machine learning algorithms with pixel-based video anomaly detection (PBVAD) and frame-based video anomaly detection (FBVAD) models. In the PBVAD model, the motion influence map (MIM) algorithm based on spatio–temporal (ST) factors is used, while in the FBVAD model, the k-nearest neighbors (kNN) and support vector machine (SVM) machine learning algorithms are used in a hybrid manner. An important result of our study is the high-performance anomaly detection achieved using the proposed hybrid algorithms on the UCF-Crime data set, which contains 128 h of original real-world video data and has not been extensively studied before. The AUC performance metrics obtained using our FBVAD-kNN algorithm in experiments were averaged to 98.0%. Meanwhile, the success rates obtained using our PBVAD-MIM algorithm in the experiments were averaged to 80.7%. Our study contributes significantly to the prevention of possible harm by detecting anomalies in video data in a near real-time manner.
1

1 August 2021 in Smart Homecare Technology and TeleHealth
Verified
Journal Article
Open access
PDF file
Şükrü Mustafa KayaŞükrü Mustafa Kaya
Şükrü Mustafa Kaya
AEAtakan Erdem
Atakan Erdem
ALİ GÜNEŞALİ GÜNEŞ
ALİ GÜNEŞ
Background: An IoT Big Data analysis platform should be able to dynamically manage IoT data and it should be appropriate the fundamental components, known as the 5V’s of big data. Therefore, speed and accuracy are two important criteria to consider. In this context, there are no similar studies that prioritize speed and accuracy criteria in big health data. It is thought that this study and the experimental results obtained are a new approach in the field of healthcare, hence it will add novelty to the studies to be carried out. The main objective of this paper is to detect anomalies at the edge of IoT for the effective management of big health data. Methods: This study focuses on detecting anomalies on the data stream created with IoT sensors between the sensing and network layer. The classification success and data processing speed of the random cut forest, logistic regression, Naive Bayes, and neural network algorithms used for anomaly detection are compared. In order to detect anomalies in a data stream consisting of temperature, age, gender, weight, height, and time data and compare algorithms. Results: The speed and accuracy performances of ML Algorithms were compared. The performance comparison shows that the LR algorithm will be more successful in IoT systems in terms of speed, although it is very close to the RCF in terms of accuracy. Conclusion: The experimental results show that using ML algorithms on IoT edges will help make effective and timely decisions in the healthcare domain. Thus, the big data generated by the IoT sensing layer in healthcare will be formed at a more manageable level. Also, thanks to this, service providers, users, and other interested sides will be minimally affected by the negative effects of anomalous data.