Shuhao Yu

Dr. Shuhao Yu

orcid

Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
8 October 2022 in Agronomy
Verified
Journal Article
Open access
PDF file
XZXiaoyu Zhang
Xiaoyu Zhang
SYShuhao Yu
Shuhao Yu
JCJiquan Chen
Jiquan Chen
CCChaohua Cheng
Chaohua Cheng
JSJian Sun
Jian Sun
JCJianrong Chen
Jianrong Chen
Cannabis (Cannabis sativa L.) is a dioecious plant cultivated worldwide for thousands of years. Besides the narcotic and therapeutic effects, Cannabis can be used as raw materials in multiple fields, including bioenergy, textiles, food, and ecological restoration. It is also an efficient bioremediation agent for contaminated soil, as well as greenhouse gas absorption. With the expansion of the market, there has been an increased demand to develop Cannabis cultivars with enhanced traits. As a major science breakthrough, the advent of the CRISPR/Cas system will revolutionize the basic and applied research in Cannabis. This article provides an overview of the recent advances in the optimization of a transformation system and in the gene editing of Cannabis. To achieve the full potential of this environmentally friendly and sustainable crop, we highlight future directions of genetic modification as well as several bottlenecks to overcome.

3 March 2021 in The Plant Genome
Verified
Journal Article
Open access
PDF file
SYShuhao Yu
Shuhao Yu
TFTilin Fang
Tilin Fang
HDHongxu Dong
Hongxu Dong
LYLiuling Yan
Liuling Yan
DMDennis L. Martin
Dennis L. Martin
Yanqi WuYanqi Wu
Yanqi Wu
Cynodon transvaalensis Burtt‐Davy is frequently used to cross with C. dactylon Pers. in the creation of F 1 hybrid cultivars that are some of the most widely used in the worldwide turf industry. However, molecular resource development in this species is limited. Accordingly, the objectives of this study were to construct a high‐density genetic map, and to identify genomic regions associated with establishment rate. In this study, we constructed the first high‐density linkage map for African bermudagrass using a genotyping by sequencing approach based on 109 S 1 progenies. A total of 1,246 single nucleotide polymorphisms and 32 simple sequence repeat markers were integrated in the linkage map. The total length of nine linkage groups was 882.3 cM, with an average distance of 0.69 cM per interval. Four genomic regions were identified to be associated with sod establishment rate. The results provide important genetic resources towards understanding the genome as well as marker‐assisted selection for improving the establishment rate in bermudagrass breeding.

11 December 2021 in Agronomy
Verified
Journal Article
Open access
PDF file
SYShuhao Yu
Shuhao Yu
SASilvano O. Assanga
Silvano O. Assanga
JAJoseph M. Awika
Joseph M. Awika
AIAmir M. H. Ibrahim
Amir M. H. Ibrahim
JRJackie C. Rudd
Jackie C. Rudd
Shuyu LiuShuyu Liu
Shuyu Liu
To meet the demands of different wheat-based food products, traits related to end-use quality become indispensable components in wheat improvement. Thus, markers associated with these traits are valuable for the timely evaluation of protein content, kernel physical characteristics, and rheological properties. Hereunder, we report the mapping results of quantitative trait loci (QTLs) linked to end-use quality traits. We used a dense genetic map with 5199 SNPs from a 90K array based on a recombinant inbred line (RIL) population derived from ‘CO960293-2’/‘TAM 111’. The population was evaluated for flour protein concentration, kernel characteristics, dough rheological properties, and grain mineral concentrations. An inclusive composite interval mapping model for individual and across-environment QTL analyses revealed 22 consistent QTLs identified in two or more environments. Chromosomes 1A, 1B, and 1D had clustered QTLs associated with rheological parameters. Glu-D1 loci from CO960293-2 and either low-molecular-weight glutenin subunits or gliadin loci on 1A, 1B, and 1D influenced dough mixing properties substantially, with up to 34.2% of the total phenotypic variation explained (PVE). A total of five QTLs associated with grain Cd, Co, and Mo concentrations were identified on 3B, 5A, and 7B, explaining up to 11.6% of PVE. The results provide important genetic resources towards understanding the genetic bases of end-use quality traits. Information about the novel and consistent QTLs provided solid foundations for further characterization and marker designing to assist selections for end-use quality improvements.

12 June 2024 in Horticulture Research
Verified
Journal Article
Open access
PDF file
GXGencheng Xu
Gencheng Xu
YLYongbei Liu
Yongbei Liu
SYShuhao Yu
Shuhao Yu
DKDejing Kong
Dejing Kong
KTKailei Tang
Kailei Tang
XZXiaoyu Zhang
Xiaoyu Zhang
Female inflorescence is the primary output of medical Cannabis. It contains hundreds of cannabinoids that accumulate in the glandular trichomes. However, little is known about the genetic mechanisms governing Cannabis inflorescence development. In this study, we reported the map-based cloning of a gene determining the number of inflorescences per branch. We named this gene CsMIKC1 since it encodes a transcription factor that belongs to the MIKC-type MADS subfamily. Constitutive overexpression of CsMIKC1 increases inflorescence number per branch, thereby promoting flower production as well as grain yield in transgenic Cannabis plants. We further identified a plant-specific transcription factor, CsBPC2, promoting the expression of CsMIKC1. CsBPC2 mutants and CsMIKC1 mutants were successfully created using the CRISPR-Cas9 system; they exhibited similar inflorescence degeneration and grain reduction. We also validated the interaction of CsMIKC1 with CsVIP3, which suppressed expression of four inflorescence development-related genes in Cannabis. Our findings establish important roles for CsMIKC1 in Cannabis, which could represent a previously unrecognized mechanism of inflorescence development regulated by ethylene.

17 September 2023 in Agronomy
Verified
Journal Article
Open access
PDF file
MCMustafa Cerit
Mustafa Cerit
ZWZhen Wang
Zhen Wang
MDMehmet Dogan
Mehmet Dogan
SYShuhao Yu
Shuhao Yu
JVJorge L. Valenzuela-Antelo
Jorge L. Valenzuela-Antelo
Shuyu LiuShuyu Liu
Shuyu Liu
Understanding genetic architectures of yield and yield-related traits of wheat (Triticum aestivum L.) grown under dryland or irrigated conditions is pivotal for developing modern high-yielding germplasm and cultivars. The objectives of this study were to detect quantitative trait loci (QTL) linked to yield and yield components using a mapping population derived from ‘TAM 113’/‘Gallagher’, including 191 recombinant inbred lines (RILs). The population was grown in McGregor, College Station, and Bushland, Texas, for three consecutive years from 2019 to 2021. A high-density genetic map covering all 21 chromosomes was constructed using a set of 8,075 single nucleotide polymorphisms (SNPs) obtained using genotyping-by-sequencing (GBS). A total of 147 QTLs for 16 yield-related traits were identified, which included 16 QTLs consistently detected in multiple experiments and 8 QTLs that showed pleiotropic effects. Of them, five pleiotropic QTLs overlapped with the consistent QTL. They increased grain yield (YLD) up to 37.64 g m−2, thousand kernel weight (TKW) up to 1.33 g, harvest (HI) up to 0.97%, kernel length up to 0.08 mm, and kernel width up to 0.04 mm with Gallagher alleles and increased YLD up to 22.21 g m−2, kernels spike−1 up to 1.77, TKW up to 1.14 g, and HI up to 3.72% with TAM 113 alleles. One major and consistent QTL on chromosome 2D at 34.4 Mbp overlapped with the major photoperiod gene Ppd-D1 and was affected by multiple traits, including kernel diameter (DIAM), TKW, kernel hardness index (KHI), heading date (HD), and plant height (PH). Another QTL cluster region on 7D between 52 and 66 Mbp, encompassing one consistent and three pleiotropic QTLs. One of the pleiotropic QTLs at 52 Mbp increased YLD up to 24.16 g m−2, HI up to 1%, and DIAM up to 0.03 mm. This study dissected genetic loci associated with yield and yield-related traits, providing valuable information on wheat improvement using marker-assisted selection (MAS).

4 April 2023 in Agrosystems, Geosciences & Environment
Verified
Journal Article
Open access
SYShuhao Yu
Shuhao Yu
CFCharles Fontanier
Charles Fontanier
DMDennis L. Martin
Dennis L. Martin
JMJustin Q. Moss
Justin Q. Moss
CGCarla Lynn Goad
Carla Lynn Goad
Yanqi WuYanqi Wu
Yanqi Wu
Winterkill is a major concern for turf‐type bermudagrasses [Cynodon dactylon (L.) Pers. and C. dactylon (L.) Pers. × C. transvaalensis Burtt‐Davy] when cultivated in the US transition zone and frequently occurring drought conditions challenge bermudagrass management. Therefore, developing new bermudagrasses with both drought resistance and winter survivability are needed for the future sustainability of the turfgrass industry in the transition zone. How these two traits interact within bermudagrass populations is not widely reported. Accordingly, the objectives of this study were to estimate reliability for spring green‐up (SG) (as an indicator of winter survivability) and drought response in turf‐type bermudagrasses. A total of 77 experimental genotypes and 7 cultivars were planted in a randomized complete block design with 3 replications over 2 years in Goodwell, OK, USA. Substantial genetic variations were found for drought response and SG parameters when analyzed by year, but variations for SG parameters and leaf firing were not significant when analyzed across years. The reliability estimates for drought response ranged from low to moderate (i2 = 0.24–0.61), whereas the subsequent estimates for SG were low (i2 = 0.13–0.33), suggesting poor reliability. The low‐to‐moderate reliability values in SG were likely due to antecedent drought injuries, indicating that winter survivability and drought resistance may need to be evaluated in separate trials.