Samah A. Alharbi

Dr. Samah A. Alharbi

orcid
Associate Professor

Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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30 November 2020 in Forests
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RARahmah AlQthanin
Rahmah AlQthanin
SASamah A. Alharbi
Samah A. Alharbi
Avicennia marina (Forssk.) Vierh is distributed in patches along the Farasan archipelago coast and is the most common mangrove species in the Red Sea. However, to date, no studies have been directed towards understanding its genetic variation in the Farasan archipelago. In this investigation, genetic variations within and among natural populations of Avicennia marina in the Farasan archipelago were studied using 15 microsatellite markers. The study found 142 alleles on 15 loci in nine populations. The observed (Ho) and expected (He) heterozygosity values were 0.351 and 0.391, respectively, which are much lower than those of earlier studies on A. marina in the Arabian Gulf. An inbreeding effect from self-pollination might explain its heterozygote deficiency. Population genetic differentiation (FST = 0.301) was similar to other mangrove species. Our findings suggest that the sea current direction and coastal geomorphology might affect genetic dispersal of A. marina. The more isolated populations with fewer connections by sea currents exhibited lower genetic variation and differentiation between populations. The genetic clustering of populations fell into three main groups—Group 1 (populations of Farasan Alkabir Island), Group 2 (populations of Sajid Island), and Group 3 (mix of one population of Farasan Alkabir Island and a population of Zifaf Island). More genetic variation and less genetic differentiation occurred when the population was not isolated and had a direct connection with sea currents. Both of these factors contributed to limited propagule dispersal and produced significant structures among the population. It is expected that the results of this research will be useful in determining policy and species-conservation strategies and in the rehabilitation of A. marina mangrove stands on the Farasan islands in an effort to save this significant natural resource.

31 August 2022 in BMC Genomics
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Journal Article
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WAWidad Saleem Aljuhani
Widad Saleem Aljuhani
SASamah A. Alharbi
Samah A. Alharbi
NANora M. Al Aboud
Nora M. Al Aboud
AAAshwaq Y. Aljohani
Ashwaq Y. Aljohani
Background: Balanites aegyptiaca (L.) Delile, commonly known as desert date, is a thorny evergreen tree belonging to the family Zygophyllaceae and subfamily Tribuloideae that is widespread in arid and semiarid regions. This plant is an important source of food and medicines and plays an important role in conservation strategies for restoring degraded desert ecosystems. Results: In the present study, we sequenced the complete plastome of B. aegyptiaca. The chloroplast genome was 155,800 bp, with a typical four-region structure: a large single copy (LSC) region of 86,562 bp, a small single copy (SSC) region of 18,102 bp, and inverted repeat regions (IRa and IRb) of 25,568 bp each. The GC content was 35.5%. The chloroplast genome of B. aegyptiaca contains 107 genes, 75 of which coding proteins, 28 coding tRNA, and 4 coding rRNA. We did not observe a large loss in plastid genes or a reduction in the genome size in B. aegyptiaca, as found previously in some species belonging to the family Zygophyllaceae. However, we noticed a divergence in the location of certain genes at the IR-LSC and IR-SSC boundaries and loss of ndh genes relative to other species. Furthermore, the phylogenetic tree constructed from the complete chloroplast genome data broadly supported the taxonomic classification of B. aegyptiaca as belonging to the Zygophyllaceae family. The plastome of B. aegyptiaca was found to be rich in single sequence repeats (SSRs), with a total of 240 SSRs. Conclusions: The genomic data available from this study could be useful for developing molecular markers to evaluate population structure, investigate genetic variation, and improve production programs for B. aegyptiaca. Furthermore, the current data will support future investigation of the evolution of the family Zygophyllaceae.

5 March 2021 in PhytoKeys
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SASamah A. Alharbi
Samah A. Alharbi
RARahmah AlQthanin
Rahmah AlQthanin
This study provides a taxonomic revision for Ceropegia sect. Huernia in the flora of Saudi Arabia. Forty-six quantitative and qualitative morphological characters were analysed using principal component analysis (PCA), principal coordinates analysis (PCoA) and the unweighted pairs group using mean average (UPGMA) to separate and help delimit taxa. We propose to reduce the number of species reported in Saudi Arabia from 11 to four: C. khalidbinsultaniicomb. nov., C. laevis, C. lodarensis and C. macrocarpa. This study also suggested reducing two names to varietal level under C. lodarensis (var. foetidacomb. nov. and var. rubrostictacomb. nov.). A key to the species, detailed morphological descriptions, illustrations, distribution maps, ecology, etymology and preliminary conservation assessments are provided that follow IUCN criteria.

19 November 2023 in Egyptian Journal of Botany
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Journal Article
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SASamah A. Alharbi
Samah A. Alharbi
OAOthman Saad Saeed Al-Hawshabi
Othman Saad Saeed Al-Hawshabi
Mohamed Owis BadryMohamed Owis Badry
Mohamed Owis Badry
This study presents a taxonomic revision of the genus Corchorus L. (tribe Grewieae, subfamily Grewioideae, Malvaceae s.l.) in Toor Al-Baha district, Lahij Governorate, Yemen. The revision is based on about 33 specimens collected from different locations and habitats in the study area. Four species of Corchorus were recognized and identified; three were native to the study area (C. depressus, C. tridens, C. trilocularis), and one was cultivated for its edible leaves (C. olitorius). The morphological characteristics of the vegetative and reproductive parts, such as leaf shape and size, stipule type, flower number and length of the pedicel, and seed shape, colour, and length, were proved to have high taxonomic significance in distinguishing between the four species belonging to the genus Corchorus. An artificial key to the four species, full species descriptions, photos, updated names, synonymy, local names, and distribution maps are provided to facilitate the identification and recognition of these species.

1 September 2020 in Journal of Asia-Pacific Biodiversity
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Journal Article
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SASamah A. Alharbi
Samah A. Alharbi
RARahmah N. Al-Qthanin
Rahmah N. Al-Qthanin

4 December 2022 in Forests
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SASamah A. Alharbi
Samah A. Alharbi
WAWidad Saleem Aljuhani
Widad Saleem Aljuhani
EAEnas Albokhari
Enas Albokhari
The Ficus populifolia Vahl. in the Arabian Peninsula is threatened, peripheral, and geographically isolated from its main population in Africa. Here, the entire plastome of F. populifolia from the Arabian Peninsula was sequenced and analyzed to provide a baseline genetic resource for future research. The F. populifolia plastome has a classic quadripartite structure with a size of 160,610 bp, the large and small single copies of 88,729 and 20,097 bp, respectively, and each pair of inverted repeats are 25,892 bp. The genome includes 113 unique genes, 79 protein-coding genes, 30 tRNAs, and 4 rRNAs. The results reveal a total of 49 long repeats, including (30) palindromic, (14) forward, and (5) reverse repeats. Similarly, a total of 186 simple sequence repeats were identified, 83.8% of which were mononucleotides. The genomic comparison with four Ficus species indicated that the plastome of F. populifolia was highly conserved, with some hypervariable noncoding regions. The phylogenomic analysis of 28 species of Ficus, based on 78 coding genes, revealed that F. populifolia is closely related to the African species F. lyrata. The genomic data generated in this study provide valuable resources for future investigations on the population genetics, authentication, and genetic conservation of the wild Arabian population of F. populifolia.