Yu-Fan Li

Dr. Yu-Fan Li

orcid

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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11 May 2022 in Horticulturae
Verified
Journal Article
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XWXiao-Ru Wei
Xiao-Ru Wei
WLWu Ling
Wu Ling
YMYu-Wan Ma
Yu-Wan Ma
JDJiao-Lin Du
Jiao-Lin Du
FCFuXiang Cao
FuXiang Cao
YLYu-Fan Li
Yu-Fan Li
Trehalose and some members of the trehalose 6-phosphate synthase (TPS) gene family play important roles in response to abiotic stress in plants. However, no studies investigating the TPS gene in rose have been reported. In this study, the trehalose content in the stems and roots of Rosa chinensis was significantly increased under heat stress, and nine TPS family members were identified from the genome of R. chinensis. The R. chinensis TPS (RcTPS) family members could be divided into two subfamilies based on the structure and phylogenetic analysis. In this study, we found that segmental duplications contributed to the expansion of the RcTPS gene family, and the type II subfamily gene pairs RcTPS9–RcTPS10 and RcTPS7a–RcTPS7b were created by segmental duplication events. The type I subfamily RcTPS members contained 17 exons in the protein-coding region, whereas type II subfamily members only had 3 or 4 exons. Most cis-acting elements in the promoters of RcTPS members were related to plant hormones, especially ABA hormones. A phylogenetic tree of 78 TPS homologous amino acids from R. chinensis and another 7 species was constructed, which could be divided into 5 clades, and purity selection was observed to be the dominant evolutionary selection pressure. Under heat stress, except for RcTPS1b, the other eight RcTPS members were upregulated in the roots, stems, orleaves. The type II subfamily members RcTPS7a and RcTPS7b showed significantly high expression patterns in response to heat stress in all three tissues. Our findings indicate that RcTPS7a and RcTPS7b may play important roles in the heat tolerance of R. chinensis and are helpful for future functional studies of the two RcTPS members during heat stress.

17 April 2022 in Agronomy
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Journal Article
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HCHai-Xia Chen
Hai-Xia Chen
Denghui WangDenghui Wang
Denghui Wang
YZYali Zhu
Yali Zhu
WLWenfang Li
Wenfang Li
JCJi-Ren Chen
Ji-Ren Chen
YLYu-Fan Li
Yu-Fan Li
The mechanism through which Hydrangea macrophylla are able to change color has been the focus of investigation for many studies. However, the molecular mechanism involved in the complexation of aluminum ions and anthocyanins to regulate the color change remains unclear. Here, the color-changing mechanism was investigated in Hydrangea macrophylla plants under aluminum stress using proteome and transcriptome sequencing methods. Catalase, peroxidase, superoxide dismutase, 3-O-delphinidin and Al3+ contents in sepal were significantly upregulated upon Al3+ treatment. Moreover, 1628 differentially expressed genes and 448 differentially expressed proteins were identified between the treated and untreated conditions. GO and KEGG enrichment analyses revealed that the differentially expressed genes and differentially expressed proteins were enriched in categories related to the cell wall, peroxidase activity, and peroxisome pathways. Importantly, eight genes involved in anthocyanin biosynthesis were significantly downregulated at the transcript and protein levels under aluminum stress. These results suggest that aluminum ions induce expression changes of related key genes, which regulate the hydrangea’s flower color. Overall, this study provides a valuable reference for the molecular mechanism relating to the color change and adaptation of Hydrangea macrophylla in response to aluminum stress.

22 December 2023 in Plant Physiology and Biochemistry
Verified
Journal Article
Closed access
XWXiaomei Wu
Xiaomei Wu
WLWu Ling
Wu Ling
YPYusha Pan
Yusha Pan
ZYZhengmin Yang
Zhengmin Yang
JMJie Ma
Jie Ma
YLYu-Fan Li
Yu-Fan Li

Verified
Journal Article
Open access
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XWXiao-Mei Wu
Xiao-Mei Wu
ZYZheng-Min Yang
Zheng-Min Yang
LYLin-Hao Yang
Lin-Hao Yang
RLRong Liu
Rong Liu
HCHai-Xia Chen
Hai-Xia Chen
YLYu-Fan Li
Yu-Fan Li
The photoperiodic flowering pathway is essential for plant reproduction. As blue and ultraviolet-A light receptors, cryptochromes play an important role in the photoperiodic regulation of flowering. Lilium × formolongi is an important cut flower that flowers within a year after seed propagation. Floral induction is highly sensitive to photoperiod. In this study, we isolated the CRYPTOCHROME2 gene (LfCRY2) from L. × formolongi. The predicted LfCRY2 protein was highly homologous to other CRY2 proteins. The transcription of LfCRY2 was induced by blue light. LfCRY2 exhibits its highest diurnal expression during the floral induction stage under both long-day and short-day photoperiods. Overexpression of LfCRY2 in Arabidopsis thaliana promoted flowering under long days but not short days, and inhibited hypocotyl elongation under blue light. Furthermore, LfCRY2 was located in the nucleus and could interact with L. × formolongi CONSTANS-like 9 (LfCOL9) and A. thaliana CRY-interacting basic-helix-loop-helix 1 (AtCIB1) in both yeast and onion cells, which supports the hypothesis that LfCRY2 hastens the floral transition via the CIB1-CO pathway in a manner similar to AtCRY2. These results provide evidence that LfCRY2 plays a vital role in promoting flowering under long days in L. × formolongi.

1 January 2025 in Ornamental Plant Research
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Journal Article
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YMYu-Wan Ma
Yu-Wan Ma
XLXin-Lan Lin
Xin-Lan Lin
QDQi-Han Ding
Qi-Han Ding
JDJiao-Lin Du
Jiao-Lin Du
XDXuan-Ke Dong
Xuan-Ke Dong
YLYu-Fan Li
Yu-Fan Li
Global warming-induced heat stress increasingly threatens the ornamental quality and productivity of roses. Previous studies have indicated that trehalose and the trehalose-6-phosphate synthase (TPS) gene family regulate plants' stress resistance, yet their roles in thermotolerance in rose remain uncharacterized. We previously identified RcTPS7b as a putative heat-responsive gene in Rosa chinensis 'Slater's Crimson China'. This study aimed to investigate whether exogenous trehalose enhances heat tolerance in rose, and elucidate the functional role of RcTPS7b in heat stress regulation. The results showed that exogenous application of 5 mmol/L trehalose significantly enhanced rose's heat tolerance by reducing the heat damage index, elevating superoxide dismutase (SOD) activity, and preserving the efficiency of Photosystem II (PSII). Overexpression of RcTPS7b in Arabidopsis thaliana enhanced the heat tolerance and antioxidant enzyme activities in transgenic plants, concomitant with upregulated expression of heat-resistant genes such as HEAT SHOCK FACTOR/PROTEIN (AtHSF/P). Furthermore, tobacco rattle virus-induced silencing of RcTPS7b in R. chinensis compromised thermotolerance and induced severe oxidative damage. Transient overexpression of RcTPS7b in rose petals reduced heat damage and maintained petal integrity through redox homeostasis under high temperature treatment. Collectively, this study demonstrates that exogenous trehalose potentiates RcTPS7b expression to enhance thermotolerance, revealing the trehalose metabolism pathway's pivotal role in heat stress regulation in R. chinensis, and will be helpful for the molecular breeding of heat tolerance in R. chinensis.

24 March 2025 in Horticulturae
Verified
Journal Article
Open access
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YLYingyang Li
Yingyang Li
YLYu-Fan Li
Yu-Fan Li
XDXuanke Dong
Xuanke Dong
YCYanfang Cai
Yanfang Cai
JCJiren Chen
Jiren Chen
FZFan Zhu
Fan Zhu
In vitro anther culture is a technique used to produce haploid plants when regenerating varieties with specific traits. To generate haploid plants with preferred characteristics, an anther culture technique was established for Lilium longiflorum “Show Up”. Morphological characteristics were recorded, including the flower bud length and anther color corresponding to different stages of microspore development. The effects of different flower bud lengths, various concentrations of exogenous plant growth regulators (PGRs), low-temperature pretreatment at 4 °C, and incubation under dark conditions on the induction of callus formation were studied. When the flower buds were 2.2–2.4 cm in length and the microspores were in the mononuclear development phase, callus induction reached the highest rate (15.6%). Callus was not induced when the PGRs 2,4-dichlorophenoxyacetic acid (2,4-D) and kinetin (KT) were added separately to the growth medium, but the highest callus induction rate occurred when anthers were cultured on the medium containing 2,4-D (0.75–1.0 mg/L) and KT (4 mg/L). The low-temperature pretreatment significantly enhanced the induction rate of anthers, but prolonged low-temperature pretreatment reduced the induction rate. The optimal period of cultivation in darkness was 6 d. After 15 days of cultivation, the number of swollen anthers was recorded, and these were transferred onto the differentiation medium Murashige and Skoog (MS) + 1-naphthaleneacetic acid (NAA) (2.0 mg/L), sucrose (30 g/L), and agar (7 g/L) at pH 5.8, whereon 100% differentiation was recorded. Overall, 14 regenerated lines were obtained by in vitro anther culture. Chromosome ploidy was determined by counting chromosomes in the root tips of ten regenerated plants, and four were found to be haploids. This study lays the foundation for anther culture in lilies to shorten the breeding cycle, improve selection efficiency, facilitate efficient genetic transformation, and enable the effective production of both haploid and double-haploid plants.