João Ricardo. R. Dórea

Dr. João Ricardo. R. Dórea


Research Focus & Metrics

Academic Career Length

17Years (2010-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
1 February 2020 in Livestock Science
Verified
Journal Article
Closed access
ACA. Cominotte
A. Cominotte
AFA.F.A. Fernandes
A.F.A. Fernandes
JDJoão Ricardo. R. Dórea
João Ricardo. R. Dórea
GRG.J.M. Rosa
G.J.M. Rosa
Marcio Machado LadeiraMarcio Machado Ladeira
Marcio Machado Ladeira
Otávio R. Machado NetoOtávio R. Machado Neto
Otávio R. Machado Neto

27 October 2018 in Journal of Animal Science
Verified
Journal Article
Closed access
PDF file
AFArthur F A Fernandes
Arthur F A Fernandes
JDJoão Ricardo. R. Dórea
João Ricardo. R. Dórea
RFRobert Fitzgerald
Robert Fitzgerald
WHWilliam Herring
William Herring
GRGuilherme J. M. Rosa
Guilherme J. M. Rosa
Computer vision applications in livestock are appealing since they enable measurement of traits of interest without the need to directly interact with the animals. This allows the possibility of multiple measurements of traits of interest with minimal animal stress. In the current study, an automated computer vision system was devised and evaluated for extraction of features of interest, as body measurements and shape descriptors, and prediction of body weight in pigs. From the 655 pigs that had data collected 580 had more than 5 frames recorded and were used for development of the predictive models. The cross-validation for the models developed with data from nursery and finishing pigs presented an R2 ranging from 0.86 (random selected image) to 0.94 (median of images truncated on the 3rd quartile). While, with the dataset without nursery pigs, the R2 estimates ranged from 0.70 (random selected image) to 0.84 (median of images truncated on the 3rd quartile). However, overall the mean absolute error was lower for the models fitted without data on nursery animals. From the body measures extracted from the image, body volume, area and length were the most informative for prediction of body weight. The inclusion of the remaining body measurements (width and heights) or shape descriptors to the model promoted significant improvement of the predictions, while the further inclusion of sex and line effects were not significant.

1 July 2018 in Journal of Dairy Science
Verified
Journal Article
Closed access
JDJoão Ricardo. R. Dórea
João Ricardo. R. Dórea
GRG.J.M. Rosa
G.J.M. Rosa
KWK.A. Weld
K.A. Weld
LAL.E. Armentano
L.E. Armentano
Feed intake is one of the most important components of feed efficiency in dairy systems. However, it is a difficult trait to measure in commercial operations for individual cows. Milk spectrum from mid-infrared spectroscopy has been previously used to predict milk traits, and could be an alternative to predict dry matter intake (DMI). The objectives of this study were (1) to evaluate if milk spectra can improve DMI predictions based only on cow variables; (2) to compare artificial neural network (ANN) and partial least squares (PLS) predictions; and (3) to evaluate if wavelength (WL) selection through Bayesian network (BN) improves prediction quality. Milk samples (n = 1,279) from 308 mid-lactation dairy cows [127 ± 27 d in milk (DIM)] were collected between 2014 and 2016. For each milk spectra time point, DMI (kg/d), body weight (BW, kg), milk yield (MY, kg/d), fat (%), protein (%), lactose (%), and actual DIM were recorded. The DMI was predicted with ANN and PLS using different combinations of explanatory variables. Such combinations, called covariate sets, were as follows: set 1 (MY, BW0.75, DIM, and 361 WL); set 2 [MY, BW0.75, DIM, and 33 WL (WL selected by BN)]; set 3 (MY, BW0.75, DIM, and fat, protein, and lactose concentrations); set 4 (MY, BW0.75, DIM, 33 WL, fat, protein, and lactose); set 5 (MY, BW0.75, DIM, 33 WL, and visit duration in the feed bunk); set 6 (MY, DIM, and 33 WL); set 7 (MY, BW0.75, and DIM); set-WL (included 361 WL); and set-BN (included just 33 selected WL). All models (i.e., each combination of covariate set and fitting approach, ANN or PLS) were validated with an external data set. The use of ANN improved the performance of models 2, 5, 6, and BN. The use of BN combined with ANN yielded the highest accuracy and precision. The addition of individual WL compared with milk components (set 2 vs. set 3) did not improve prediction quality when using PLS. However, when ANN was employed, the model prediction with the inclusion of 33 WL was improved over the model containing only milk components (set 2 vs. set 3; concordance correlation coefficient = 0.80 vs. 0.72; coefficient of determination = 0.67 vs. 0.53; root mean square error of prediction 2.36 vs. 2.81 kg/d). The use of ANN and the inclusion of a behavior parameter, set 5, resulted in the best predictions compared with all other models (coefficient of determination = 0.70, concordance correlation coefficient = 0.83, root mean square error of prediction = 2.15 kg/d). The addition of milk spectra information to models containing cow variables improved the accuracy and precision of DMI predictions in lactating dairy cows when ANN was used. The use of BN to select more informative WL improved the model prediction when combined with cow variables, with further improvement when combined with ANN.

1 December 2010 in Revista Brasileira de Zootecnia
Verified
Journal Article
Open access
PDF file
Anderson de Moura ZanineAnderson de Moura Zanine
Anderson de Moura Zanine
ESEdson Mauro Santos
Edson Mauro Santos
JDJoão Ricardo. R. Dórea
João Ricardo. R. Dórea
PDPaulo Alfredo de Santana Dantas
Paulo Alfredo de Santana Dantas
TSThiago Carvalho da Silva
Thiago Carvalho da Silva
OPOdilon Gomes Pereira
Odilon Gomes Pereira
The objective of this experiment was to evaluate the effects of adding cassava scrapings on gas and effluent losses, dry matter recovery, pH, contents of N-NH3, organic acids and volatile fatty acids and the bromatological composition of elephant grass silages. It was used a randomized complete design, with four levels of cassava scrapings (0, 7, 15 or 30% natural matter) each one with four replications per level. The grass was cut at 50 days of regrowth and ensiled in 15-L silos, equipped with a Bunsen valve to allow gas outflow. The gas losses decreased quadratically with the addition of cassava scrapings, whereas effluent losses decreased linearly. Dry matter recovery increased quadratically with the addition of cassava scrapings. Dry matter (DM) concentration increased but crude protein (CP), neutral detergent fiber (NDF), acid detergent fiber (ADF) and hemicellulose (HEM) decreased linearly with the addition of cassava scrapings. The pH value and lactic acid concentration increased quadratically with the addition of cassava scrapings. Contents of N-NH3 and butyric acid decreased quadratically with the addition of cassava scrapings, whereas acetic acid content decreased linearly. Addition of cassava scrapings reduced gas and effluent losses and improved the fermentation profile of elephant grass silages and the level of 7% already ensures this improvement.


1 March 2018 in Journal of Dairy Science
Verified
Journal Article
Closed access
TCT.L. Chandler
T.L. Chandler
RPRyan Pralle
Ryan Pralle
JDJoão Ricardo. R. Dórea
João Ricardo. R. Dórea
SPS.E. Poock
S.E. Poock
GOG.R. Oetzel
G.R. Oetzel
HWHeather White
Heather White
Although cowside testing strategies for diagnosing hyperketonemia (HYK) are available, many are labor intensive and costly, and some lack sufficient accuracy. Predicting milk ketone bodies by Fourier transform infrared spectrometry during routine milk sampling may offer a more practical monitoring strategy. The objectives of this study were to (1) develop linear and logistic regression models using all available test-day milk and performance variables for predicting HYK and (2) compare prediction methods (Fourier transform infrared milk ketone bodies, linear regression models, and logistic regression models) to determine which is the most predictive of HYK. Given the data available, a secondary objective was to evaluate differences in test-day milk and performance variables (continuous measurements) between Holsteins and Jerseys and between cows with or without HYK within breed. Blood samples were collected on the same day as milk sampling from 658 Holstein and 468 Jersey cows between 5 and 20 d in milk (DIM). Diagnosis of HYK was at a serum β-hydroxybutyrate (BHB) concentration ≥1.2 mmol/L. Concentrations of milk BHB and acetone were predicted by Fourier transform infrared spectrometry (Foss Analytical, Hillerød, Denmark). Thresholds of milk BHB and acetone were tested for diagnostic accuracy, and logistic models were built from continuous variables to predict HYK in primiparous and multiparous cows within breed. Linear models were constructed from continuous variables for primiparous and multiparous cows within breed that were 5 to 11 DIM or 12 to 20 DIM. Milk ketone body thresholds diagnosed HYK with 64.0 to 92.9% accuracy in Holsteins and 59.1 to 86.6% accuracy in Jerseys. Logistic models predicted HYK with 82.6 to 97.3% accuracy. Internally cross-validated multiple linear regression models diagnosed HYK of Holstein cows with 97.8% accuracy for primiparous and 83.3% accuracy for multiparous cows. Accuracy of Jersey models was 81.3% in primiparous and 83.4% in multiparous cows. These results suggest that predicting serum BHB from continuous test-day milk and performance variables could serve as a valuable diagnostic tool for monitoring HYK in Holstein and Jersey herds.