Biocrusts form a living soil cover in Australia’s northern savannas, delivering essential ecosystem services. More accessible tools are needed to quantify and monitor ground cover, including biocrusts, as current methodologies are time-consuming, expensive, or specialised. At Victoria River Research Station (Northern Territory, Australia), long-term fire research plots were used to monitor the response of low vegetative ground and soil covers for different burning intervals and seasons. Mobile phone photographs were analysed using machine-learning software and a derived decision tree-based segmentation model (DTSM). The resulting data were compared to visual in-field assessment by trained researchers. Visual assessments and photographs were taken at two time points during the post-fire recovery period, mid-wet and dry seasons, at three burning intervals (2, 4, and 6 years) and for two different burning times, early or late dry season. DTSM-derived grass and litter cover were statistically similar to field observations in the burnt and unburnt plots. Biocrust cover derived from DTSM also matched field observations in fire treatments and unburnt control plots in the dry season, except when obscured by grass or litter. In the wet season, DTSM underestimated biocrust cover in some treatments, and DTSM did not detect biocrust obscured under dense grass cover. Nevertheless, biocrust pigment analysis confirmed a significant presence of biocrusts both on seemingly bare soil and under the grass canopy. We concluded that mobile phone photographs are suitable for monitoring dry-season ground cover. When similar colours of grass and litter cover were combined, the modelled accuracy reached 95–97%. With some refinements, DTSM analysis of photographs could accurately quantify the impact of fire disturbance on biocrusts and grass cover. However, it would be advantageous to improve the model by additional field records to determine how much biocrust occurs under the grass. This study provides land managers with an efficient method of recording ground cover over time to aid land-condition assessments.

The Boodjamulla National Park research station is situated in the north-western Queensland dry savannah, where the climate is dominated by summer monsoons and virtually dry winters. Under shrub canopies and in between the tussock grasses cyanobacterial crusts almost entirely cover the flood plain soil surfaces. Seasonality drives N fixation, and in the savannah this has a large impact on both plant and soil function. Many cyanobacteria fix dinitrogen that is liberated into the soil in both inorganic and organic N forms. We examined cyanobacterial species richness and bioavailable N spanning 7 months of a typical wet season. Over the wet season cyanobacterial richness ranged from 6 to 19 species. N-fixing Scytonema accounted for seasonal averages between 51 and 93 % of the biocrust. Cyanobacterial richness was highly correlated with N fixation and bioavailable N in 0–1 cm. Key N-fixing species such as Nostoc, Symploca and Gloeocapsa significantly enriched soil N although Nostoc was the most influential. Total seasonal N fixation by cyanobacteria demonstrated the variability in productivity according to the number of wet days as well as the follow-on days where the soil retained adequate moisture. Based on total active days per month we estimated that N soil enrichment via cyanobacteria would be ∼ 5.2 kg ha⁻¹ annually which is comparable to global averages. This is a substantial contribution to the nutrient-deficient savannah soils that are almost entirely reliant on the wet season for microbial turnover of organic matter. Such well-defined seasonal trends and synchronisation in cyanobacterial species richness, N fixation, bioavailable N and C fixation (Büdel et al., 2018) provide important contributions to multifunctional microprocesses and soil fertility.

Effective grazing management in Australia’s semi-arid rangelands requires monitoring landscape conditions and identifying sustainable and productive practice through understanding the interactions of environmental factors and management of soil health. Challenges include extreme rainfall variability, intensifying drought, and inherently nutrient-poor soils. We investigated the impacts of grazing strategies on landscape function—specifically soil health—as the foundation for productive pastures, integrating the heterogenous nature of grass tussocks and the interspaces that naturally exist in between them. At Wambiana—a long-term research site in north-eastern Australia—we studied two soil types, two stocking rates (high, moderate), and resting land from grazing during wet seasons (rotational spelling). Rotational spelling had the highest biocrust (living soil cover), in interspaces and under grass tussocks. Biocrusts were dominated by cyanobacteria that binds soil particles, reduces erosion, sequesters carbon, fixes nitrogen, and improves soil fertility. Rotational spelling with a moderate stocking rate emerged as best practice at these sites, with adjustment of stocking rates in line with rainfall and soil type recommended. In drought-prone environments, monitoring the presence and integrity of biocrusts connects landscape function and soil health. Biocrusts that protect and enrich the soil will support long-term ecosystem integrity and economic profitability of cattle production in rangelands.

Boodjamulla National Park research station is situated in north-west Queensland in the dry savannah where the climate is dominated by summer monsoons and virtually dry winters. Cyanobacterial crusts almost entirely cover the flood plain soil surfaces in between the tussock grasses. Cyanobacteria fix dinitrogen that is liberated into the soil in both inorganic and organic N forms. Seasonality drives N-fixation and in the savannah, this has a large impact on both plant and soil function. In this research project, we examined the cyanobacterial species richness and bioavailable N spanning the seven months of a typical wet season. We hypothesised that cyanobacterial richness and bioavailable N would peak at the time of the heaviest rains and gradually decline in the latter stages of the wet season. We also anticipated that the abundance of N-fixing cyanobacteria would be correlated to N-fixation and N-enrichment of the surface soils. Over the wet season cyanobacterial richness ranged from 6–19 species. N-fixing Scytonema accounted on average across the season for 74 % of the biocrust in varying proportions throughout the season. Cyanobacterial richness was highly correlated with N-fixation and bioavailable N in 0–1 cm. It was established key N-fixing species such as Nostoc, Symploca and Gloeocapsa significantly enriched soil N although Nostoc was the most influential. Total seasonal N fixation by cyanobacteria demonstrated the variability in productivity according to the number of wet days as well as the follow-on days where the soil retained adequate moisture. Based on total active days per month we estimated that N-soil enrichment via cyanobacteria would be ~ 5.2 kg ha⁻¹ annually which is comparable to global averages. This is a substantial contribution to the nutrient deficient savannah soils that are almost entirely reliant on the wet season for microbial turnover of organic matter. This seasonal pattern in atmospheric N-fixation and transformation to a bioavailable form was also present in C-fixation results from parallel research. Such well-defined seasonal trends and synchronisation in cyanobacterial species richness, N-fixation, bioavailable N and C fixation provide significant contributions to multi-functional microprocesses and soil fertility.

Mining rehabilitation requires key solutions to complex issues relating to ecosystem function. In arid landscapes, the removal or disturbance of topsoil incorporating soil microbial communities can result in a shift in ecosystem function. Soil surfaces in arid regions are protected by biocrusts that regulate soil moisture, sequester carbon and fix significant quantities of atmospheric nitrogen. Cyanobacteria often dominate these bioactive surfaces and work as ecosystem engineers in that they are in sufficiently large quantities they initiate biocrust establishment and facilitate soil surface stabilisation. Cyanobacterial exopolymeric secretions form cohesive and protective layers at the soil surface that minimise wind erosion. This research encompassed soil microbial community profiling (using a polyphasic approach) with a focus on biobanking topsoil for rehabilitation purposes. The research was in collaboration with Iluka Resources at Jacinth–Ambrosia (J–A) mineral sand mine located in a semi-arid chenopod shrubland in southern Australia. At J–A diverse biocrusts included a significant representation of cyanobacteria, lichens and mosses that inhabited nearly half of all soil surfaces. Cyanobacterial community structure at J–A was comprised of a variety of species having a range of attributes that contributed to their resilience and survival in an arid environment. Stockpiling from shallow scrapings and storage at low profiles appeared beneficial in microbial biobanking cyanobacterial inoculum that would facilitate recovery over time. These studies have provided information for the establishment of a monitoring program that assesses the re-establishment of biocrusts following mining. Following soil stockpiling that occurred during the mining process, cyanobacterial taxa recovered at different rates. Cyanobacterial strategies central to survival include exopolymeric production, spectral adaptation, nitrogen fixation and motility. Biocrust re-establishment during mining rehabilitation relies on the role of cyanobacteria as a means of early soil stabilisation. Provided there is adequate cyanobacterial inoculum in the topsoil stockpiles their growth and the subsequent crust formation should take place largely unassisted. Ongoing monitoring of biocrust recovery is important as it provides an effective means of measuring important soil restoration processes.