Ibrahim Cakmak

Prof. Ibrahim Cakmak

orcid

Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 August 2017 in Biological Control
Verified
Journal Article
Closed access
YDYagmur Oyku Dogan
Yagmur Oyku Dogan
SHSelcuk Hazir
Selcuk Hazir
AYAyhan Yildiz
Ayhan Yildiz
TBTariq M. Butt
Tariq M. Butt
ICIbrahim Cakmak
Ibrahim Cakmak

6 November 2019 in Angewandte Chemie International Edition
Verified
Journal Article
Open access
PDF file
EBEdna Bode
Edna Bode
AHAntje K Heinrich
Antje K Heinrich
MHMerle Hirschmann
Merle Hirschmann
DADesalegne Abebew
Desalegne Abebew
YSYan-Ni Shi
Yan-Ni Shi
HBHelge B Bode
Helge B Bode
Natural products (NPs) from microorganisms have been important sources for discovering new therapeutic and chemical entities. While their corresponding biosynthetic gene clusters (BGCs) can be easily identified by gene‐sequence‐similarity‐based bioinformatics strategies, the actual access to these NPs for structure elucidation and bioactivity testing remains difficult. Deletion of the gene encoding the RNA chaperone, Hfq, results in strains losing the production of most NPs. By exchanging the native promoter of a desired BGC against an inducible promoter in Δhfq mutants, almost exclusive production of the corresponding NP from the targeted BGC in Photorhabdus, Xenorhabdus and Pseudomonas was observed including the production of several new NPs derived from previously uncharacterized non‐ribosomal peptide synthetases (NRPS). This easyPACId approach (easy Promoter Activated Compound Identification) facilitates NP identification due to low interference from other NPs. Moreover, it allows direct bioactivity testing of supernatants containing secreted NPs, without laborious purification.

1 July 2009 in Biological Control
Verified
Journal Article
Closed access
ICIbrahim Cakmak
Ibrahim Cakmak
AJArne Janssen
Arne Janssen
MSMaurice W. Sabelis
Maurice W. Sabelis
HBHuseyin Baspinar
Huseyin Baspinar

1 January 2019 in Journal of Invertebrate Pathology
Verified
Journal Article
Closed access
CECeren Eroglu
Ceren Eroglu
CHCimen Harun
Cimen Harun
DUDerya Ulug
Derya Ulug
MKMehmet Karagoz
Mehmet Karagoz
SHSelcuk Hazir
Selcuk Hazir
ICIbrahim Cakmak
Ibrahim Cakmak

9 October 2007 in Experimental and Applied Acarology
Verified
Journal Article
Closed access
PDF file
MKMehmet Karagoz
Mehmet Karagoz
BGBaris Gulcu
Baris Gulcu
ICIbrahim Cakmak
Ibrahim Cakmak
HKHarry K. Kaya
Harry K. Kaya
SHSelçuk Hazir
Selçuk Hazir

1 August 2007 in Phytoparasitica
Verified
Journal Article
Closed access
PDF file
TATulin Aksit
Tulin Aksit
ICIbrahim Cakmak
Ibrahim Cakmak
GOGamze Ozer
Gamze Ozer