Fedho Kusuma

Mr. Fedho Kusuma

orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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Journal Article
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DLDuckgue Lee
Duckgue Lee
DHDaniel Hokinson
Daniel Hokinson
SPSoyoung Park
Soyoung Park
RERosalie Elvira
Rosalie Elvira
FKFedho Kusuma
Fedho Kusuma
JHJaeseok Han
Jaeseok Han
Endoplasmic reticulum (ER) stress is known to influence various cellular functions, including cell cycle progression. Although it is well known how ER stress inhibits cell cycle progression at the G1 phase, the molecular mechanism underlying how ER stress induces G2/M cell cycle arrest remains largely unknown. In this study, we found that ER stress and subsequent induction of the UPR led to cell cycle arrest at the G2/M phase by reducing the amount of cyclin B1. Pharmacological inhibition of the IRE1α or ATF6α signaling did not affect ER stress-induced cell cycle arrest at the G2/M phase. However, when the alpha subunit of eukaryotic translation initiation factor 2 (eIF2α) phosphorylation was genetically abrogated, the cell cycle progressed without arresting at the G2/M phase after ER stress. GEO database analysis showed that growth arrest and DNA-damage-inducible protein α (Gadd45α) were induced in an eIF2a phosphorylation-dependent manner, which was confirmed in this study. Knockdown of GADD45α abrogated cell cycle arrest at the G2/M phase upon ER stress. Finally, the cell death caused by ER stress significantly reduced when GADD45α expression was knocked down. In conclusion, GADD45α is a key mediator of ER stress-induced growth arrest via regulation of the G2/M transition and cell death through the eIF2α signaling pathway.

10 September 2025 in Molecules and Cells
Verified
Journal Article
Open access
TNThu-Hang Thi Nghiem
Thu-Hang Thi Nghiem
FKFedho Kusuma
Fedho Kusuma
JPJeongmin Park
Jeongmin Park
YJYeonsoo Joe
Yeonsoo Joe
HCHun Taeg Chung
Hun Taeg Chung
JHJaeseok Han
Jaeseok Han
Ferroptosis is an iron-dependent, lipid-peroxidation-driven form of regulated cell death that is distinct from apoptosis and necroptosis. Its involvement in various diseases highlights the need for reliable detection strategies. We provide a concise guide for ferroptosis detection, outlining key mechanisms, including iron metabolism, lipid remodeling, and antioxidant failure. Cellular, biochemical, genetic, and morphological methods, including viability assays, lipid reactive oxygen species probes, and electron microscopy, have been used to identify ferroptosis in vitro and in vivo. A multiparametric approach is emphasized to ensure the specificity and reproducibility.

19 July 2022 in Journal of Biological Chemistry
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Journal Article
Open access
ZFZeenat Farooq
Zeenat Farooq
FKFedho Kusuma
Fedho Kusuma
PBPhillip Burke
Phillip Burke
CDCatherine R. Dufour
Catherine R. Dufour
DLDuckgue Lee
Duckgue Lee
STSoroush Tahmasebi
Soroush Tahmasebi
La-related protein 1 (LARP1) has been identified as a key translational inhibitor of terminal oligopyrimidine (TOP) mRNAs downstream of the nutrient sensing protein kinase complex, mTORC1. LARP1 exerts this inhibitory effect on TOP mRNA translation by binding to the mRNA cap and the adjacent 5′TOP motif, resulting in the displacement of the cap-binding protein eIF4E from TOP mRNAs. However, the involvement of additional signaling pathway in regulating LARP1-mediated inhibition of TOP mRNA translation is largely unexplored. In the present study, we identify a second nutrient sensing kinase GCN2 that converges on LARP1 to control TOP mRNA translation. Using chromatin-immunoprecipitation followed by massive parallel sequencing (ChIP-seq) analysis of activating transcription factor 4 (ATF4), an effector of GCN2 in nutrient stress conditions, in WT and GCN2 KO mouse embryonic fibroblasts, we determined that LARP1 is a GCN2-dependent transcriptional target of ATF4. Moreover, we identified GCN1, a GCN2 activator, participates in a complex with LARP1 on stalled ribosomes, suggesting a role for GCN1 in LARP1-mediated translation inhibition in response to ribosome stalling. Therefore, our data suggest that the GCN2 pathway controls LARP1 activity via two mechanisms: ATF4-dependent transcriptional induction of LARP1 mRNA and GCN1-mediated recruitment of LARP1 to stalled ribosomes.

Verified
Journal Article
Open access
PDF file
FKFedho Kusuma
Fedho Kusuma
SPSoyoung Park
Soyoung Park
KNKim Anh Nguyen
Kim Anh Nguyen
RERosalie Elvira
Rosalie Elvira
DLDuckgue Lee
Duckgue Lee
JHJaeseok Han
Jaeseok Han
Mitochondrial stress, resulting from dysfunction and proteostasis disturbances, triggers the mitochondrial unfolded protein response (UPRMT), which activates gene encoding chaperones and proteases to restore mitochondrial function. Although ATFS-1 mediates mitochondrial stress UPRMT induction in C. elegans, the mechanisms relaying mitochondrial stress signals to the nucleus in mammals remain poorly defined. Here, we explored the role of protein kinase R (PKR), an eIF2α kinase activated by double-stranded RNAs (dsRNAs), in mitochondrial stress signaling. We found that UPRMT does not occur in cells lacking PKR, indicating its crucial role in this process. Mechanistically, we observed that dsRNAs accumulate within mitochondria under stress conditions, along with unprocessed mitochondrial transcripts. Furthermore, we demonstrated that accumulated mitochondrial dsRNAs in mouse embryonic fibroblasts (MEFs) deficient in the Bax/Bak channels are not released into the cytosol and do not induce the UPRMT upon mitochondrial stress, suggesting a potential role of the Bax/Bak channels in mediating the mitochondrial stress response. These discoveries enhance our understanding of how cells maintain mitochondrial integrity, respond to mitochondrial dysfunction, and communicate stress signals to the nucleus through retrograde signaling. This knowledge provides valuable insights into prospective therapeutic targets for diseases associated with mitochondrial stress.