Lyudmila Kokaeva

Dr. Lyudmila Kokaeva

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Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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24 October 2017 in Journal of Plant Diseases and Protection
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Journal Article
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LKLyudmila Kokaeva
Lyudmila Kokaeva
ABArseniy F. Belosokhov
Arseniy F. Belosokhov
LDLarisa Y. Doeva
Larisa Y. Doeva
ESEkaterina S. Skolotneva
Ekaterina S. Skolotneva
SESergey N. Elansky
Sergey N. Elansky

20 August 2022 in Diversity
Verified
Journal Article
Open access
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LKLyudmila Kokaeva
Lyudmila Kokaeva
MYMaria Yarmeeva
Maria Yarmeeva
ZKZarema Kokaeva
Zarema Kokaeva
ECElena M. Chudinova
Elena M. Chudinova
PBPetr N. Balabko
Petr N. Balabko
SESergey Elansky
Sergey Elansky
Early blight (EB) is a destructive disease affecting potato and tomato plants in Russia, caused by a heterogeneous group of plant pathogenic Alternaria fungi. The current species delimitation in Alternaria sect. Porri with medium to large conidia and a long (filamentous) beak is based on molecular data. In this study, the ITS, GAPDH, RPB2, TEF1, and Alt a 1 gene regions were analyzed in 41 large-spored Alternaria isolates obtained from diseased potato and tomato plants collected from 13 regions in Russia. Our data revealed five pathogenic species (A. alternariacida, A. grandis, A. linariae, A. protenta, and A. solani). Two species (A. solani and A. linariae) were found to be associated with early blight of tomato. Alternaria linariae and A. protenta were confirmed as the major causal agents of tomato and potato early blight, respectively. There were no phylogenetic groupings among tested Russian Alternaria isolates associated with their locality.

13 November 2017 in Journal of Plant Diseases and Protection
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Journal Article
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GBGrigoriy L. Belov
Grigoriy L. Belov
ABArseniy F. Belosokhov
Arseniy F. Belosokhov
IKIrina A. Kutuzova
Irina A. Kutuzova
NSNatalia Statsyuk
Natalia Statsyuk
ECElena M. Chudinova
Elena M. Chudinova
SESergey N. Elansky
Sergey N. Elansky

7 March 2022 in Molecules
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Journal Article
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AKAnastasia Kuvarina
Anastasia Kuvarina
IGIrina A. Gavryushina
Irina A. Gavryushina
MSMaxim Sukonnikov
Maxim Sukonnikov
TETatiana Efimenko
Tatiana Efimenko
NMNatalia Markelova
Natalia Markelova
VSVera Sadykova
Vera Sadykova
Features of the biochemical adaptations of alkaliphilic fungi to exist in extreme environments could promote the production of active antibiotic compounds with the potential to control microorganisms, causing infections associated with health care. Thirty-eight alkaliphilic and alkalitolerant Emericellopsis strains (E. alkalina, E. cf. maritima, E. cf. terricola, Emericellopsis sp.) isolated from different saline soda soils and belonging to marine, terrestrial, and soda soil ecological clades were investigated for emericellipsin A (EmiA) biosynthesis, an antifungal peptaibol previously described for Emericellopsis alkalina. The analysis of the Emericellopsis sp. strains belonging to marine and terrestrial clades from chloride soils revealed another novel form with a mass of 1032.7 Da, defined by MALDI-TOF Ms/Ms spectrometers, as the EmiA lacked a hydroxyl (dEmiA). EmiA displayed strong inhibitory effects on cell proliferation and viability of HCT 116 cells in a dose- and time-dependent manners and induced apoptosis.

23 June 2022 in Journal of Fungi
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AKAnastasia Kuvarina
Anastasia Kuvarina
EREugene Rogozhin
Eugene Rogozhin
MSMaxim Sukonnikov
Maxim Sukonnikov
ATAlla V. Timofeeva
Alla V. Timofeeva
MSMarina Serebryakova
Marina Serebryakova
VSVera Sadykova
Vera Sadykova
The adaptations that alkaliphilic microorganisms have developed due to their extreme habitats promote the production of active natural compounds with the potential to control microorganisms, causing infections associated with healthcare. The primary purpose of this study was to isolate and identify a hydrophobin, Sa-HFB1, from an alkaliphilic fungus, Sodiomyces alkalinus. A potential antifungal effect against pathogenic and opportunistic fungi strains was determined. The MICs of Sa-HFB1 against opportunistic and clinical fungi ranged from 1 to 8 µg/mL and confirmed its higher activity against both non- and clinical isolates. The highest level of antifungal activity (MIC 1 µg/mL) was demonstrated for the clinical isolate Cryptococcus neoformans 297 m. The hydrophobin Sa-HFB1 may be partly responsible for the reported antifungal activity of S. alkalinus, and may serve as a potential source of lead compounds, meaning that it can be developed as an antifungal drug candidate.

8 July 2021 in Mycologia
Verified
Journal Article
Open access
IVIlya Viner
Ilya Viner
LKLyudmila Kokaeva
Lyudmila Kokaeva
VSViacheslav Spirin
Viacheslav Spirin
OMOtto Miettinen
Otto Miettinen
Modern taxonomic studies of Agaricomycetes rely on the integrative analyses of morphology, environmental data, geographic distribution, and usually several DNA loci. However, sampling and selection of DNA loci for the analyses are commonly shallow. In this study, we suggest minimal numbers of necessary specimens to sample and DNA loci to analyze in order to prevent inadequate taxonomic decisions in species groups with minor morphological and genealogical differences. We sampled four unlinked nuclear DNA gene regions (nuc rDNA ITS1-5.8S-ITS2, gh63, rpb2, and tef1) to revise the systematics of a common wood-decaying species Basidioradulum radula (Hymenochaetales) on an intercontinental set of specimens collected in the Northern Hemisphere. The DNA loci analyzed violate the genealogical concordance phylogenetic species recognition principles, thus confirming a single-species interpretation. We conclude that Hyphodontia syringae is a younger synonym of B. radula.