Aspergillosis is pervasive in bird populations, especially those under human care. Its management can be critically impacted by exposure to high levels of conidia and by resistance to azole drugs. The fungal contamination in the environment of a Humboldt penguin (Spheniscus humboldti) group, housed in a French zoological park next to numerous large crop fields, was assessed through three serial sessions of surface sampling in nests, in 2018-20: all isolates were counted and characterized by sequencing. When identified as A. fumigatus, they were systematically screened for resistance mutations in the cyp51A gene and tested for MICs determination. In the same time, the clinical incidence of aspergillosis was evaluated in the penguin population by the means of systematic necropsy and mycological investigations. A microsatellite-based analysis tracked the circulation of A. fumigatus strains. Environmental investigations highlighted substantial increase of the fungal load during the summer season (>12-fold vs. the other timepoints) and large overrepresentation of species belonging to the Aspergillus section Fumigati, ranging from 22.7 to 94.6% relative prevalence. Only one cryptic species was detected (A. nishimurae), and one isolate exhibited G138S resistance mutation with elevated MICs. The overall incidence of aspergillosis was measured at ∼3.4% case-years, and mostly in juveniles. The analysis of microsatellite polymorphism revealed a high level of genetic diversity among A. fumigatus clinical isolates. In contrast, one environmental strain appeared largely overrepresented during the summer sampling session. In all, the rural location of the zoo did not influence the emergence of resistant strains. - The incidence of aspergillosis in the penguin population of a French zoo found elevated, mostly in juveniles - The fungal contamination was high in the surrounding environment, especially at the end of summer - Globally, a great level of genetic diversity was observed, except for one clonal strain

Background: The astonishing variety of sounds that birds can produce has been the subject of many studies aiming to identify the underlying anatomical and physical mechanisms of sound production. An interesting feature of some bird vocalisations is the simultaneous production of two different frequencies. While most work has been focusing on songbirds, much less is known about dual-sound production in non-passerines, although their sound production organ, the syrinx, would technically allow many of them to produce “two voices”. Here, we focus on the king penguin, a colonial seabird whose calls consist of two fundamental frequency bands and their respective harmonics. The calls are produced during courtship and for partner and offspring reunions and encode the birds’ identity. We dissected, μCT-scanned and analysed the vocal tracts of six adult king penguins from Possession Island, Crozet Archipelago.Results: King penguins possess a bronchial type syrinx that, similarly to the songbird’s tracheobronchial syrinx, has two sets of vibratory tissues, and thus two separate sound sources. Left and right medial labium differ consistently in diameter between 0.5 and 3.2%, with no laterality between left and right side. The trachea has a conical shape, increasing in diameter from caudal to cranial by 16%. About 80% of the king penguins’ trachea is medially divided by a septum consisting of soft elastic tissue (septum trachealis medialis).Conclusions: The king penguins’ vocal tract appears to be mainly adapted to the life in a noisy colony of a species that relies on individual vocal recognition. The extent between the two voices encoding for individuality seems morphologically dictated by the length difference between left and right medial labium. The septum trachealis medialis might support this extent and could therefore be an important anatomical feature that aids in the individual recognition process.

Farmland species face many threats, including habitat loss and malnutrition during key periods of their life cycle. This is aggravated in conventionally managed monocultures, leading to nutrient deficiencies that impair the survival and reproduction of farmland wildlife. For instance, protein deficiencies in wheat or vitamin B3 deficiency in maize reduce by up to 87% the reproductive success of the critically endangered common hamster (Cricetus cricetus), a flagship species of European farmlands. It is urgent to identify and implement agricultural practices that can overcome these deficiencies and help restoring hamsters’ reproductive success. As part of a conservation program to diversify farming habitats in collaboration with farmers, we tested whether associations between wheat or maize and three supplemental crops (soybean, sunflower and fodder radish) supported hamsters’ performance during hibernation and reproduction. We observed that maize–sunflower, maize–radish and wheat–soybean associations minimized hamsters’ body mass loss during hibernation. The wheat–soybean association led to the highest reproductive success (N = 2 litters of 4.5 ± 0.7 pups with a 100% survival rate to weaning), followed by maize–sunflower and maize–radish. These crop associations offer promising opportunities to overcome nutritional deficiencies caused by cereal monocultures. Their agronomic potential should promote their implementation on a large scale and benefit farmland biodiversity beyond the common hamster.