Sachin Kumar

Dr. Sachin Kumar

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Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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20 September 2019 in Frontiers in Immunology
Verified
Journal Article
Open access
SKSachin Kumar
Sachin Kumar
MDMadhu Dikshit
Madhu Dikshit
Neutrophils are the most abundant, short lived, and terminally differentiated leukocytes with distinct tiers of arsenals to counter pathogens. Neutrophils were traditionally considered transcriptionally inactive cells, but recent researches in the field led to a paradigm shift in neutrophil biology and revealed subpopulation heterogeneity, and functions pivotal to immunity and inflammation. Furthermore, recent unfolding of metabolic plasticity in neutrophils has challenged the long-standing concept of their sole dependence on glycolytic pathway. Metabolic adaptations and distinct regulations have been identified which are critical for neutrophil differentiation and functions. The metabolic reprogramming of neutrophils by inflammatory mediators or during pathologies such as sepsis, diabetes, glucose-6-phosphate dehydrogenase deficiency, glycogen storage diseases, systemic lupus erythematosus, rheumatoid arthritis, and cancer are now being explored. In this review, we discuss recent developments in understanding of the metabolic regulation, that may provide clues for better management and newer therapeutic opportunities for neutrophil centric immuno-deficiencies and inflammatory disorders.

26 October 2021 in Immunology
Verified
Journal Article
Open access
PDF file
ASApurwa Singhal
Apurwa Singhal
SKSachin Kumar
Sachin Kumar
Neutrophil‐centred inflammation and flawed clearance of neutrophils cause and exuberate multiple pathological conditions. These most abundant leukocytes exhibit very high daily turnover in steady‐state and stress conditions. Various armours including oxidative burst, NETs and proteases function against pathogens, but also dispose neutrophils to spawn pro‐inflammatory responses. Neutrophils undergo death through different pathways upon ageing, infection, executing the intruder's elimination. These include non‐lytic apoptosis and other lytic deaths including NETosis, necroptosis and pyroptosis with distinct disintegration of the cellular membrane. This causes release and presence of different intracellular cytotoxic, and tissue‐damaging content as cell remnants in the extracellular environment. The apoptotic cells and apoptotic bodies get cleared with non‐inflammatory outcomes, while lytic deaths associated remnants including histones and cell‐free DNA cause pro‐inflammatory responses. Indeed, the enhanced frequencies of neutrophil‐associated proteases, cell‐free DNA and autoantibodies in diverse pathologies including sepsis, asthma, lupus and rheumatoid arthritis, imply disturbed neutrophil resolution programmes in inflammatory and autoimmune diseases. Thus, the clearance mechanisms of neutrophils and associated remnants are vital for therapeutics. Though studies focused on clearance mechanisms of senescent or apoptotic neutrophils so far generated a good understanding of the same, clearance of neutrophils undergoing distinct lytic deaths, including NETs, are being the subjects of intense investigations. Here, in this review, we are providing the current updates in the clearance mechanisms of apoptotic neutrophils and focusing on not so well‐defined recognition, uptake and degradation of neutrophils undergoing lytic death and associated remnants that may provide new therapeutic approaches in inflammation and autoimmunity.

6 January 2022 in Cells
Verified
Journal Article
Open access
PDF file
ASApurwa Singhal
Apurwa Singhal
SYShubhi Yadav
Shubhi Yadav
TCTulika Chandra
Tulika Chandra
Shrikant R. MulayShrikant R. Mulay
Shrikant R. Mulay
AGAnil Nilkanth Gaikwad
Anil Nilkanth Gaikwad
SKSachin Kumar
Sachin Kumar
Neutrophil extracellular traps (NETs) are associated with multiple disease pathologies including sepsis, asthma, rheumatoid arthritis, cancer, systemic lupus erythematosus, acute respiratory distress syndrome, and COVID-19. NETs, being a disintegrated death form, suffered inconsistency in their identification, nomenclature, and quantifications that hindered therapeutic approaches using NETs as a target. Multiple strategies including microscopy, ELISA, immunoblotting, flow cytometry, and image-stream-based methods have exhibited drawbacks such as being subjective, non-specific, error-prone, and not being high throughput, and thus demand the development of innovative and efficient approaches for their analyses. Here, we established an imaging and computational algorithm using high content screening (HCS)—cellomics platform that aid in easy, rapid, and specific detection as well as analyses of NETs. This method employed membrane-permeable and impermeable DNA dyes in situ to identify NET-forming cells. Automated algorithm-driven single-cell analysis of change in nuclear morphology, increase in nuclear area, and change in intensities provided precise detection of NET-forming cells and eliminated user bias with other cell death modalities. Further combination with Annexin V staining in situ detected specific death pathway, e.g., apoptosis, and thus, discriminated between NETs, apoptosis, and necrosis. Our approach does not utilize fixation and permeabilization steps that disturb NETs, and thus, allows the time-dependent monitoring of NETs. Together, this specific imaging-based high throughput method for NETs analyses may provide a good platform for the discovery of potential inhibitors of NET formation and/or agents to modulate neutrophil death, e.g., NETosis-apoptosis switch, as an alternative strategy to enhance the resolution of inflammation.

21 March 2023 in EMBO Reports
Verified
Journal Article
Open access
SKSachin Kumar
Sachin Kumar
JVJeffrey D Vassallo
Jeffrey D Vassallo
KNKalpana J Nattamai
Kalpana J Nattamai
AHAishlin Hassan
Aishlin Hassan
RKRebekah Karns
Rebekah Karns
HGHartmut Geiger
Hartmut Geiger
Upon ex vivo culture, hematopoietic stem cells (HSCs) quickly lose potential and differentiate into progenitors. The identification of culture conditions that maintain the potential of HSCs ex vivo is therefore of high clinical interest. Here, we demonstrate that the potential of murine and human HSCs is maintained when cultivated for 2 days ex vivo at a pH of 6.9, in contrast to cultivation at the commonly used pH of 7.4. When cultivated at a pH of 6.9, HSCs remain smaller, less metabolically active, less proliferative and show enhanced reconstitution ability upon transplantation compared to HSC cultivated at pH 7.4. HSCs kept at pH 6.9 show an attenuated polyamine pathway. Pharmacological inhibition of the polyamine pathway in HSCs cultivated at pH 7.4 with DFMO mimics phenotypes and potential of HSCs cultivated at pH 6.9. Ex vivo exposure to a pH of 6.9 is therefore a positive regulator of HSC function by reducing polyamines. These findings might improve HSC short‐term cultivation protocols for transplantation and gene therapy interventions.

23 October 2019 in Inflammation
Verified
Journal Article
Closed access
PDF file
SNSheela Nagarkoti
Sheela Nagarkoti
MDMegha Dubey
Megha Dubey
SSSamreen Sadaf
Samreen Sadaf
Deepika AwasthiDeepika Awasthi
Deepika Awasthi
TCTulika Chandra
Tulika Chandra
MDMadhu Dikshit
Madhu Dikshit

1 November 2021 in Biochimica et Biophysica Acta (BBA) - Molecular Cell Research
Verified
Journal Article
Closed access
ASApurwa Singhal
Apurwa Singhal
PDPriyanka Dhankani
Priyanka Dhankani
KGKanchan Lata Gupta
Kanchan Lata Gupta
JMJayashree Mazumder
Jayashree Mazumder
ARAdithya R
Adithya R
SKSachin Kumar
Sachin Kumar