Drought severely limits the growth and development of oat (Avena sativa) seedlings. As an osmotic regulator simulating a drought environment, Polyethylene glycol (PEG) has been widely linked in response to plant drought tolerance. However, the underlying mechanism of oats’ response to PEG stress is still largely unknown. Here, we investigated the physiological and transcriptome variables of the drought-resistant oat variety DA92-2F6, and the drought-susceptible variety Longyan 3 under 15% PEG-6000 drought stress to better understand the underlying drought tolerance molecular mechanisms. The physiological results showed that except for the cell membrane permeability, the antioxidant enzyme, osmotic adjustment substance, and photosynthetic efficiency were significantly higher in the DA92-2F6 after 7 d stress. Further, 12 cDNA libraries and 123,223 unigenes were obtained by RNA-seq. A total of 33,857 differentially expressed genes (DEGs) were detected, of which two co-upregulated and three co-downregulated in four comparisons. We highlighted an analysis of the DEGs in phytohormone signal transduction pathway. The auxin, cytokinin, and brassinosteroid signaling pathways, were suppressed in Longyan 3, while abscisic acid and jasmonic acid signaling pathways were mainly activated in DA92-2F6 under drought stress. The upregulated of PP2C, ABF, SNRK2, GID1, JAZ, and MYC2 genes may enhance the drought tolerance of DA92-2F6. Taken together, these results provided a new transcript resource for the drought tolerance improvement and a reference for oat drought resistance molecular breeding.

Soil salinity is a major abiotic stress limiting crop production globally. Oat (Avena sativa) is an annual cereal with a strong salt tolerance, a high yield, and nutritional quality, although the mechanisms underlying its salt stress response remain largely unknown. We examined the physiological and transcriptomic responses of A. sativa seedlings to salt stress in tolerant cultivar Qingyongjiu 195 and sensitive cultivar 709. Under salt stress, Qingyongjiu 195 maintained a higher photosynthetic efficiency, antioxidant enzymes activity, and leaf K⁺ accumulation but a lower Na⁺ uptake than 709. RNA-seq revealed 6616 differentially expressed genes (DEGs), including 4265 up- and 2351 downregulated. These were enriched in pathways like plant–pathogen interaction, phenylpropanoid biosynthesis, and MAPK signaling. We specifically highlight DEGs involved in photosynthesis (chlG, CP47 psbB, COX2, LHCB) and antioxidants (trxA, GroES). Qingyongjiu 195 also appeared to enhance K⁺ uptake via KAT1 and AKT2 and sequester Na⁺ in vacuoles via NHX2. Additionally, HKT restricted Na⁺ while promoting K⁺ transport to shoots, maintaining K⁺/Na⁺. The expression levels of CAX, ACA, CML, CaM, and CDPK in Qingyongjiu 195 were higher than those in 709. Oats regulated Ca²⁺ concentration through CAX and ACA after salt stress, decoded Ca²⁺ signals through CML, and then transferred Ca²⁺ signals to downstream receptors through the Ca²⁺ sensors CaM and CDPK, thereby activating K⁺/Na⁺ transporters, such as SOS1 and NHX, etc. Our results shed light on plant salt stress response mechanisms and provide transcriptomic resources for molecular breeding in improving salt tolerance in oats.

Background: The Domain of unknown function 679 membrane proteins (DMPs) family, as a green plant-specific membrane protein, plays an important role in plant reproductive development, stress response and aging. To identify the DMP gene members of oat (AsDMP) and to investigate their family structural features and tissue expression profile characteristics, a study was conducted. Based on the whole genome and transcriptome data, in this investigation, we have scrutinized the physicochemical properties, gene structure, cisacting elements, phylogenetic relationships, conserved structural (CS) domains, CS motifs and expression patterns of the AsDMP family of oat. Results The DMP family genes of oat were found distributed across 17 chromosomal scaffolds with 33 members. We could divide the AsDMP genes into five subfamilies based on phylogenetic relationships. The gene structure suggests that oats may have also undergone an intron loss event during evolution. Covariance analysis suggests that genome-wide duplication/segmental duplication may be the major contributor to the expansion of the AsDMP gene family. Ka/Ks selective pressure analysis of oat DMP gene family, suggests that DMP gene pairs tend to be conserved over evolutionary time. The upstream promoter of these genes containing several cis-acting elements indicates a plausible role in abiotic stress and hormone induction. Gene expression pattern according to transcriptome data revealed participation of the DMP genes in tissue and organ development. In this study, AsDMP genes (AsDMP1, AsDMP19, and AsDMP22) were identified as potentially regulating oat seed senescence, and can be used as candidate genes for seed longevity and anti-aging germplasm breeding studies in oat. The study provides valuable information on the regulatory mechanism of the AsDMP gene family in the aging process of oat germplasm, and also provides theoretical support for further function investigation in the oat DMP gene and the molecular mechanism of seed anti-aging. Conclusions In this study, we found that the AsDMP gene is involved in the aging process of oat seeds, which is the first report on the potential role of DMP genes in oat seeds.

Soil desertification is a serious problem in arid northwestern China that threatens ecological sustainability. Artemisia sphaerocephala, a dominant shrub species, play an important role in the conservation of water and the restoration of soil in the desert ecosystem. However, the poor establishment of A. sphaerocephala often limits plant revegetation, and the optimal population density for sustainable growth is largely unknown. Here, we determined key soil properties and plant growth characteristics associated with different population densities of A. sphaerocephala (including from 1.1, 2.1, 3.1, 3.9 to 5.3 plants per m²) in the resource-limited Alashan desert of northwestern China. The results showed that plant population density was the primary factor determining the revegetation of A. sphaerocephala, followed by soil water availability. Soil N, P and K content, and soil fractal dimensions also contributed to the vegetation and productivity. Soil nutrients were mostly accumulated in the topsoil layers, coincidental with the root distribution pattern in which 57% to 82% of total roots were distributed in the top 20 cm soil layer. The concentrations of soil nutrients in higher population densities (3.9 to 5.3 plants per m²) were greater than those in lower population densities (1.1 to 2.1 plants per m²), suggesting that A. sphaerocephala may have the ability to promote nutrient cycling in the desert ecosystem. We conclude that the optimal population density for the best growth of revegetated A. sphaerocephala was 3 plants per m².