Samirjit Das

Dr. Samirjit Das

Department of Anesthesiology & Critical Care Medicine, Cardiovascular Division, Department of Pathology, Johns Hopkins School of Medicine, Baltimore, MD 21205, USA
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Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 November 2017 in Antioxidants & Redox Signaling
Verified
Journal Article
Closed access
TKTengku Ain Kamalden
Tengku Ain Kamalden
AMAnne M. Macgregor-Das
Anne M. Macgregor-Das
SKSangeetha Marimuthu Kannan
Sangeetha Marimuthu Kannan
BDBrittany Dunkerly-Eyring
Brittany Dunkerly-Eyring
NKNurliza Khaliddin
Nurliza Khaliddin
SDSamirjit Das
Samirjit Das
Aims: MicroRNAs (miRNAs), one type of noncoding RNA, modulate post-transcriptional gene expression in various pathogenic pathways in type 2 diabetes (T2D). Currently, little is known about how miRNAs influence disease pathogenesis by targeting cells at a distance. The purpose of this study was to investigate the role of exosomal miRNAs during T2D. Results: We show that miR-15a is increased in the plasma of diabetic patients, correlating with disease severity. miR-15 plays an important role in insulin production in pancreatic β-cells. By culturing rat pancreatic β-cells (INS-1) cells in high-glucose media, we identified a source of increased miR-15a in the blood as exosomes secreted by pancreatic β-cells. We postulate that miR-15a, produced in pancreatic β-cells, can enter the bloodstream and contribute to retinal injury. miR-15a overexpression in Müller cells can be induced by exposing Müller cells to exosomes derived from INS-1 cells under high-glucose conditions and results in oxidative stress by targeting Akt3, which leads to apoptotic cell death. The in vivo relevance of these findings is supported by results from high-fat diet and pancreatic β-cell-specific miR-15a −/− mice. Innovation: This study highlights an important and underappreciated mechanism of remote cell–cell communication (exosomal transfer of miRNA) and its influence on the development of T2D complications. Conclusion: Our findings suggest that circulating miR-15a contributes to the pathogenesis of diabetes and supports the concept that miRNAs released by one cell type can travel through the circulation and play a role in disease progression via their transfer to different cell types, inducing oxidative stress and cell injury. Antioxid. Redox Signal. 27, 913–930.

1 March 2017 in Journal of the American Heart Association
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Journal Article
Open access
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SDSamirjit Das
Samirjit Das
MKMark Kohr
Mark Kohr
BDBrittany Dunkerly‐Eyring
Brittany Dunkerly‐Eyring
DLDong I. Lee
Dong I. Lee
DBDjahida Bedja
Djahida Bedja
CSCharles Steenbergen
Charles Steenbergen
Background: Micro RNA (miRNA) is a type of noncoding RNA that can repress the expression of target genes through posttranscriptional regulation. In addition to numerous physiologic roles for mi RNA s, they play an important role in pathophysiologic processes affecting cardiovascular health. Previously, we reported that nuclear encoded microRNA (miR‐181c) is present in heart mitochondria, and importantly, its overexpression affects mitochondrial function by regulating mitochondrial gene expression. Methods and Results: To investigate further how the miR‐181 family affects the heart, we suppressed miR‐181 using a miR‐181‐sponge containing 10 repeated complementary miR‐181 “seed” sequences and generated a set of H9c2 cells, a cell line derived from rat myoblast, by stably expressing either a scrambled or miR‐181‐sponge sequence. Sponge‐H9c2 cells showed a decrease in reactive oxygen species production and reduced basal mitochondrial respiration and protection against doxorubicin‐induced oxidative stress. We also found that miR‐181a/b targets phosphatase and tensin homolog ( PTEN ), and the sponge‐expressing stable cells had increased PTEN activity and decreased PI 3K signaling. In addition, we have used miR‐181a/b −/− and miR‐181c/d −/− knockout mice and subjected them to ischemia‐reperfusion injury. Our results suggest divergent effects of different miR‐181 family members: miR‐181a/b targets PTEN in the cytosol, resulting in an increase in infarct size in miR‐181a/b −/− mice due to increased PTEN signaling, whereas miR‐181c targets mt‐ COX 1 in the mitochondria, resulting in decreased infarct size in miR‐181c/d −/− mice. Conclusions: The miR‐181 family alters the myocardial response to oxidative stress, notably with detrimental effects by targeting mt‐ COX 1 (miR‐181c) or with protection by targeting PTEN (miR‐181a/b).

1 August 2018 in American Journal of Physiology-Heart and Circulatory Physiology
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Journal Article
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AMAnne M. Macgregor-Das
Anne M. Macgregor-Das
SDSamirjit Das
Samirjit Das
MicroRNAs (miRNAs) are known as the master regulators of gene expression, and for the last two decades our knowledge of their functional reach keeps expanding. Recent studies have shown that a miRNA’s role in regulation extends to extracellular and intracellular organelles. Several studies have shown a role for miRNA in regulating the mitochondrial genome in normal and disease conditions. Mitochondrial dysfunction occurs in many human pathologies, such as cardiovascular disease, diabetes, cancer, and neurological diseases. These studies have shed some light on regulation of the mitochondrial genome as well as helped to explain the role of miRNA in altering mitochondrial function and the ensuing effects on cells. Although the field has grown in recent years, many questions still remain. For example, little is known about how nuclear-encoded miRNAs translocate to the mitochondrial matrix. Knowledge of the mechanisms of miRNA transport into the mitochondrial matrix is likely to provide important insights into our understanding of disease pathophysiology and could represent new targets for therapeutic intervention. For this review, our focus will be on the role of a subset of miRNAs, known as MitomiR, in mitochondrial function. We also discuss the potential mechanisms used by these nuclear-encoded miRNAs for import into the mitochondrial compartment. Listen to this article’s corresponding podcast at http://ajpheart.podbean.com/e/microrna-translocation-into-the-mitochondria/ .

30 September 2019 in Journal of Clinical Investigation
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WDW. Brian Dalton
W. Brian Dalton
EHEric Helmenstine
Eric Helmenstine
NWNoel Walsh
Noel Walsh
LGLukasz P. Gondek
Lukasz P. Gondek
DKDhanashree S. Kelkar
Dhanashree S. Kelkar
BPBen Ho Park
Ben Ho Park
Cancer-associated mutations in the spliceosome gene SF3B1 create a neomorphic protein that produces aberrant mRNA splicing in hundreds of genes, but the ensuing biologic and therapeutic consequences of this missplicing are not well understood. Here we have provided evidence that aberrant splicing by mutant SF3B1 altered the transcriptome, proteome, and metabolome of human cells, leading to missplicing-associated downregulation of metabolic genes, decreased mitochondrial respiration, and suppression of the serine synthesis pathway. We also found that mutant SF3B1 induces vulnerability to deprivation of the nonessential amino acid serine, which was mediated by missplicing-associated downregulation of the serine synthesis pathway enzyme PHGDH. This vulnerability was manifest both in vitro and in vivo, as dietary restriction of serine and glycine in mice was able to inhibit the growth of SF3B1MUT xenografts. These findings describe a role for SF3B1 mutations in altered energy metabolism, and they offer a new therapeutic strategy against SF3B1MUT cancers.

21 March 2017 in PLOS ONE
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Journal Article
Open access
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DHDaijiro Hori
Daijiro Hori
BDBrittany Dunkerly-Eyring
Brittany Dunkerly-Eyring
YNYohei Nomura
Yohei Nomura
DBDebjit Biswas
Debjit Biswas
JSJochen Steppan
Jochen Steppan
SDSamirjit Das
Samirjit Das
Endothelial dysfunction and arterial stiffening play major roles in cardiovascular diseases. The critical role for the miR-181 family in vascular inflammation has been documented. Here we tested whether the miR-181 family can influence the pathogenesis of hypertension and vascular stiffening. qPCR data showed a significant decrease in miR-181b expression in the aorta of the older mice. Eight miR-181a1/b1-/- mice and wild types (C57BL6J:WT) were followed weekly for pulse wave velocity (PWV) and blood pressure measurements. After 20 weeks, the mice were tested for endothelial function and aortic modulus. There was a progressive increase in PWV and higher systolic blood pressure in miR-181a1/b1-/- mice compared with WTs. At 21 weeks, aortic modulus was significantly greater in the miR-181a1/b1-/- group, and serum TGF-β was found to be elevated at this time. A luciferase reporter assay confirmed miR-181b targets TGF-βi (TGF-β induced) in the aortic VSMCs. In contrast, wire myography revealed unaltered endothelial function along with higher nitric oxide production in the miR-181a1/b1-/- group. Cultured VECs and VSMCs from the mouse aorta showed more secreted TGF-β in VSMCs of the miR-181a1/b1-/- group; whereas, no change was observed from VECs. Circulating levels of angiotensin II were similar in both groups. Treatment with losartan (0.6 g/L) prevented the increase in PWV, blood pressure, and vascular stiffness in miR-181a1/b1-/- mice. Immunohistochemistry and western blot for p-SMAD2/3 validated the inhibitory effect of losartan on TGF-β signaling in miR-181a1/b1-/- mice. Decreased miR-181b with aging plays a critical role in ECM remodeling by removing the brake on the TGF-β, pSMAD2/3 pathway.

1 May 2019 in Archives of Biochemistry and Biophysics
Verified
Journal Article
Closed access
RSRoman Barbara Soledad
Roman Barbara Soledad
SCSteenbergen Charles
Steenbergen Charles
SDSamirjit Das
Samirjit Das