Sustaining soil health cannot be divorced from sustainable crop production. Organic, or natural, farming is being promoted as a good sustainable agriculture practice. One aspect of organic farming that could significantly enhance and sustain soil health, soil quality, and crop productivity is the use of high-quality soil conditioners or organic amendments produced from agro-wastes. Thus, the objective of this study was to characterize the chemical and biological properties of selected agro-wastes with potential for use as organic amendments in sustaining soil health. Standard procedures were used to produce and characterize the soil conditioners, namely fermented plant juice (FPJ), fermented fruit juice (FFJ), palm kernel shell (PKS) biochar, and kitchen waste (KW) compost. The fermented juices (FPJ and FFJ), PKS biochar, and KW compost exhibited chemical and biological properties with good potential as soil conditioners or organic amendments to sustain soil health. The fermented juices contained important microbes that can solubilize P and K in soil for crop use. The high pH and C content of the biochar and compost and the high cation exchange capacity of the biochar are good indicators of the potential of these materials to sustain soil health in terms of the liming effect of acid soils, nutrient and water retention, nutrient reserves, and a suitable habitat for microbial life. Moreover, the organic amendments contain reasonable amounts of macro- and micro-nutrients, which could be released to increase soil fertility. Despite these potential benefits, field application of these organic amendments is necessary to evaluate their effects on soil health and crop production in both the short and long term.

Black pepper (Piper nigrum) is a vital spice crop with uses ranging from culinary to pharmacological applications. However, limited genetic information has constrained the understanding of the molecular regulation of flower and fruit development in black pepper. In this study, a comparison among three different black pepper varieties, Semengok Aman (SA), Kuching (KC), and Semengok 1 (S1), with varying fruit characteristics was used to provide insight on the genetic regulation of flower and fruit development. Next-generation sequencing (NGS) technology was used to determine the flower and fruit transcriptomes by sequencing on an Illumina HiSeq 2500 platform followed byde novoassembly using SOAPdenovo-Trans. The high-quality assembly of 66,906 of unigenes included 64.4% of gene sequences (43,115) with similarity to one or more protein sequences from the GenBank database. Annotation with Blast2Go assigned 37,377 genes to one or more Gene Ontology terms. Of these genes, 5,874 genes were further associated with the biological pathways recorded in the KEGG database. Comparison of flower and fruit transcriptome data from the three different black pepper varieties revealed a large number of DEGs between flower and fruit of the SA variety. Gene Ontology (GO) enrichment analysis further supports functions of DEGs between flower and fruit in the categories of carbohydrate metabolic processes, embryo development, and DNA metabolic processes while the DEGs in fruit relate to biosynthetic process, secondary metabolic process, and catabolic process. The enrichment of DEGs in KEGG pathways was also investigated, and a large number of genes were found to belong to the nucleotide metabolism and carbohydrate metabolism categories. Gene expression profiling of flower formation-related genes reveals that other than regulating the flowering in black pepper, the flowering genes might also be implicated in the fruit development process. Transcriptional analysis of sugar transporter and carbohydrate metabolism genes in different fruit varieties suggested that the carbohydrate metabolism in black pepper fruit is developmentally regulated, and some genes might serve as potential genes for future crop quality improvement. Study on the piperine-related gene expression analysis suggested that lysine-derived products might present in all stages of fruit development, but the transportation was only active at the early stage of fruit development. These results indicate several candidate genes related to the development of flower and fruit in black pepper and provide a resource for future functional analysis and potentially for future crop improvement.