Zulzikry Hafiz Bin Abu Bakar

Dr. Zulzikry Hafiz Bin Abu Bakar

Molecular Neuroscience Research Center, Shiga University of Medical Science

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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Verified
Journal Article
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ZBZulzikry Hafiz Bin Bin Abu Bakar
Zulzikry Hafiz Bin Bin Abu Bakar
JBJean-Pierre Bellier
Jean-Pierre Bellier
DYDaijiro Yanagisawa
Daijiro Yanagisawa
TKTomoko Kato
Tomoko Kato
KMKen-ichi Mukaisho
Ken-ichi Mukaisho
Ikuo TooyamaIkuo Tooyama
Ikuo Tooyama
Mitochondrial ferritin (FtMt) is a mitochondrial iron storage protein associated with neurodegenerative diseases. In patients with progressive supranuclear palsy (PSP), FtMt was shown to accumulate in nigral neurons. Here, we investigated FtMt and LC3 in the post-mortem midbrain of PSP patients to reveal novel aspects of the pathology. Immunohistochemistry was used to assess the distribution and abnormal changes in FtMt and LC3 immunoreactivities. Colocalization analysis using double immunofluorescence was performed, and subcellular patterns were examined using 3D imaging and modeling. In the substantia nigra pars compacta (SNc), strong FtMt-IR and LC3-IR were observed in the neurons of PSP patients. In other midbrain regions, such as the superior colliculus, the FtMt-IR and LC3-IR remained unchanged. In the SNc, nigral neurons were categorized into four patterns based on subcellular LC3/FtMt immunofluorescence intensities, degree of colocalization, and subcellular overlapping. This categorization suggested that concomitant accumulation of LC3/FtMt is related to mitophagy processes. Using the LC3-IR to stage neuronal damage, we retraced LC3/FtMt patterns and revealed the progression of FtMt accumulation in nigral neurons. Informed by these findings, we proposed a hypothesis to explain the function of FtMt during PSP progression.

4 January 2023 in Cells
Verified
Journal Article
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ZBZulzikry Hafiz Bin Bin Abu Bakar
Zulzikry Hafiz Bin Bin Abu Bakar
JBJean-Pierre Bellier
Jean-Pierre Bellier
WNWan Zurinah Wan Ngah
Wan Zurinah Wan Ngah
DYDaijiro Yanagisawa
Daijiro Yanagisawa
KMKen-ichi Mukaisho
Ken-ichi Mukaisho
Ikuo TooyamaIkuo Tooyama
Ikuo Tooyama
The precision of colocalization analysis is enhanced by 3D and is potentially more accurate than 2D. Even though 3D improves the visualization of colocalization analysis, rendering a colocalization model may generate a model with numerous polygons. We developed a 3D colocalization model of FtMt/LC3 followed by simplification. Double immunofluorescence staining of FtMt and LC3 was conducted, and stacked images were acquired. We used IMARIS to render the 3D colocalization model of FtMt/LC3 and further processed it with MeshLab to decimate and generate a less complex colocalization model. We examined the available simplification algorithm using MeshLab in detail and evaluated the feasibility of each procedure in generating a model with less complexity. The quality of the simplified model was subsequently assessed. MeshLab’s available shaders were scrutinized to facilitate the spatial colocalization determination. Finally, we showed that QECD was the most effective method for reducing the polygonal complexity of the colocalization model without compromising its quality. In addition, we would recommend implementing the x-ray shader, which we found useful for visualizing colocalization. As 3D was found to be more accurate in quantifying colocalization, our study provides a novel and dependable method for rendering 3D models for colocalization analysis.

14 October 2024 in Experimental Gerontology
Verified
Journal Article
Open access
NRNur Zuliani Ramli
Nur Zuliani Ramli
Mohamad Fairuz YahayaMohamad Fairuz Yahaya
Mohamad Fairuz Yahaya
MAMohd Fahami Nur Azlina
Mohd Fahami Nur Azlina
HHHamizah Shahirah Hamezah
Hamizah Shahirah Hamezah
ZBZulzikry Hafiz Bin Bin Abu Bakar
Zulzikry Hafiz Bin Bin Abu Bakar
HDHanafi Damanhuri
Hanafi Damanhuri
The menopausal transition is a complex neuroendocrine aging process affecting brain structure and metabolic function. Such changes are consistent with neurological sequelae noted following the menopausal transition, including cognitive deficits. Although studies in rodent models of the menopause revealed changes in learning and memory, little is known about the structural and metabolic changes in the brain regions serving the cognitive function in these models. The administration 4-vinylcyclohexene diepoxide (VCD) in laboratory animals results in follicular depletion, and thus, is a powerful translational tool that models the human menopause. In the studies presented here, we evaluated behavior, brain structure, and metabolism in young female rats administered with either VCD or vehicle for 15 days across the early, mid, and post-follicular depletion states at 1-, 2-, and 3-months post-final injection, respectively. Additionally, we evaluated the serum hormonal profile and ovarian follicles based on the estrous cycle pattern. Positron emission tomography (PET) was utilized to determine regional brain glucose metabolism in the hippocampus, medial prefrontal cortex, and striatum. Subsequently, the rats were euthanized for ex-vivo magnetic resonance imaging (MRI) to assess regional brain volumes. VCD-induced rats at the post-follicular depleted time points had diminished spatial learning and memory as well as reduced hippocampal glucose uptake. Additionally, VCD-induced rats at post-follicular depletion time points had marked reductions in estradiol, progesterone, and anti-mullerian hormone with an increase in follicle-stimulating hormone. These rats also exhibited fewer ovarian follicles, indicating that substantial ovarian function loss during post-follicular time points impairs the female rats' spatial learning/memory abilities and triggers the metabolic changes in the hippocampus.

27 June 2021 in Cells
Verified
Journal Article
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NSNur Fathiah Abdul Sani
Nur Fathiah Abdul Sani
AHAhmad Imran Zaydi Amir Hamzah
Ahmad Imran Zaydi Amir Hamzah
ZBZulzikry Hafiz Bin Bin Abu Bakar
Zulzikry Hafiz Bin Bin Abu Bakar
YYYasmin Anum Mohd Yusof
Yasmin Anum Mohd Yusof
SMSuzana Makpol
Suzana Makpol
HDHanafi Damanhuri
Hanafi Damanhuri
The mechanism of cognitive aging at the molecular level is complex and not well understood. Growing evidence suggests that cognitive differences might also be caused by ethnicity. Thus, this study aims to determine the gene expression changes associated with age-related cognitive decline among Malay adults in Malaysia. A cross-sectional study was conducted on 160 healthy Malay subjects, aged between 28 and 79, and recruited around Selangor and Klang Valley, Malaysia. Gene expression analysis was performed using a HumanHT-12v4.0 Expression BeadChip microarray kit. The top 20 differentially expressed genes at p < 0.05 and fold change (FC) = 1.2 showed that PAFAH1B3, HIST1H1E, KCNA3, TM7SF2, RGS1, and TGFBRAP1 were regulated with increased age. The gene set analysis suggests that the Malay adult’s susceptibility to developing age-related cognitive decline might be due to the changes in gene expression patterns associated with inflammation, signal transduction, and metabolic pathway in the genetic network. It may, perhaps, have important implications for finding a biomarker for cognitive decline and offer molecular targets to achieve successful aging, mainly in the Malay population in Malaysia.

19 December 2023 in Biochemical and Biophysical Research Communications
Verified
Journal Article
Open access
AAAsraa Faris Aldoghachi
Asraa Faris Aldoghachi
DYDaijiro Yanagisawa
Daijiro Yanagisawa
AAAslina Pahrudin Arrozi
Aslina Pahrudin Arrozi
ZBZulzikry Hafiz Bin Bin Abu Bakar
Zulzikry Hafiz Bin Bin Abu Bakar
HTHiroyasu Taguchi
Hiroyasu Taguchi
Ikuo TooyamaIkuo Tooyama
Ikuo Tooyama
Thioredoxin interacting protein (TXNIP) has emerged as a significant regulator of β-cell mass and loss, rendering it an attractive target for treating diabetes. We previously showed that Shiga-Y6, a fluorinated curcumin derivative, inhibited TXNIP mRNA and protein expression in vitro, raising the question of whether the same effect could be translated in vivo. Herein, we examined the effect of Shiga-Y6 on TNXIP levels and explored its therapeutic potential in a mouse model of diabetes, Akita mice. We intraperitoneally injected Shiga-Y6 (SY6; 30 mg/kg of body weight) or vehicle into 8-week-old Akita mice for 28 consecutive days. On day 29, the mice were euthanized, following which the serum levels of glucose, insulin, and glucagon were measured using ELISA, the expression of TXNIP in pancreatic tissue lysates was determined using western blotting, and the level of β-cell apoptosis was assessed using the TUNEL assay. TXNIP levels in the pancreatic tissue of Akita mice were significantly elevated compared with wild-type (WT) mice. Shiga-Y6 administration for 28 days significantly lowered those levels compared with Akita mice that received vehicle to a level comparable to WT mice. In immunohistochemical analysis, both α- to β-cell ratio and the number of apoptotic β-cells were significantly reduced in SY6-treated Akita mice, compared with vehicle-treated Akita mice. Findings from the present study suggest a potential of Shiga-Y6 as an antidiabetic agent through lowering TXNIP protein levels and ameliorating pancreatic β-cells apoptosis.

2 September 2021 in Molecules
Verified
Journal Article
Open access
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AAAslina Pahrudin Arrozi
Aslina Pahrudin Arrozi
ZBZulzikry Hafiz Bin Bin Abu Bakar
Zulzikry Hafiz Bin Bin Abu Bakar
HTHiroyasu Taguchi
Hiroyasu Taguchi
DYDaijiro Yanagisawa
Daijiro Yanagisawa
Ikuo TooyamaIkuo Tooyama
Ikuo Tooyama
Thioredoxin-interacting protein (TXNIP) is involved in multiple disease-associated functions related to oxidative stress, especially by inhibiting the anti-oxidant- and thiol-reducing activity of thioredoxin (TXN). Shiga-Y5 (SY5), a fluorine-19 magnetic resonance probe for detecting amyloid-β deposition in the brain, previously showed therapeutic effects in a mouse model of Alzheimer’s disease; however, the mechanism of action of SY5 remains unclear. SY5 passes the blood–brain barrier and then undergoes hydrolysis to produce a derivative, Shiga-Y6 (SY6), which is a TXNIP-negative regulator. Therefore, this study investigates the therapeutic role of SY5 as the prodrug of SY6 in the thioredoxin system in the brain of a mouse model of Alzheimer’s disease. The intraperitoneal injection of SY5 significantly inhibited TXNIP mRNA (p = 0.0072) and protein expression (p = 0.0143) induced in the brain of APP/PS1 mice. In contrast, the levels of TXN mRNA (p = 0.0285) and protein (p = 0.0039) in the brain of APP/PS1 mice were increased after the injection of SY5. The ratio of TXN to TXNIP, which was decreased (p = 0.0131) in the brain of APP/PS1 mice, was significantly increased (p = 0.0072) after the injection of SY5. These results suggest that SY5 acts as a prodrug of SY6 in targeting the thioredoxin system and could be a potential therapeutic compound in oxidative stress-related diseases in the brain.