The combined results of ab initio electronic-structure calculations and spectroscopic investigations of jet-cooled molecules and clusters provide strong evidence of a surprisingly simple and general mechanistic picture of the nonradiative decay of biomolecules such as nucleic bases and aromatic amino acids. The key role in this picture is played by excited singlet states of πσ* character, which have repulsive potential-energy functions with respect to the stretching of OH or NH bonds. The ¹πσ* potential-energy functions intersect not only the bound potential-energy functions of the ¹ππ* excited states, but also that of the electronic ground state. Via predissociation of the ¹ππ* states and a conical intersection with the ground state, the ¹πσ* states trigger an ultrafast internal-conversion process, which is essential for the photostability of biomolecules. In protic solvents, the ¹πσ* states promote a hydrogen-transfer process from the chromophore to the solvent. Calculations for chromophore–water clusters have shown that a spontaneous charge-separation process takes place in the solvent shell, yielding a microsolvated hydronium cation and a microsolvated electron. These results suggest that the basic mechanisms of the complex photochemistry of biomolecules in liquid water can be revealed by experimental and theoretical investigations of relatively small chromophore–water clusters.

We present experimental and theoretical evidence for an excited-state deactivation mechanism specific to hydrogen-bonded aromatic dimers, which may account, in part, for the photostability of the Watson-Crick base pairs in DNA. Femtosecond time-resolved mass spectroscopy of 2-aminopyridine clusters reveals an excited-state lifetime of 65 ± 10 picoseconds for the near-planar hydrogen-bonded dimer, which is significantly shorter than the lifetime of either the monomer or the 3- and 4-membered nonplanar clusters. Ab initio calculations of reaction pathways and potential-energy profiles identify the mechanism of the enhanced excited-state decay of the dimer: Conical intersections connect the locally excited ¹ ππ* state and the electronic ground state with a ¹ ππ* charge-transfer state that is strongly stabilized by the transfer of a proton.

The UV spectra of three different conformers of the guanine/cytosine base pair were recorded recently with UV-IR double-resonance techniques in a supersonic jet [Abo-Riziq, A., Grace, L., Nir, E., Kabelac, M., Hobza, P. & de Vries, M. S. (2005) Proc . Natl . Acad . Sci . USA 102, 20–23]. The spectra provide evidence for a very efficient excited-state deactivation mechanism that is specific for the Watson–Crick structure and may be essential for the photostability of DNA. Here we report results of ab initio electronic-structure calculations for the excited electronic states of the three lowest-energy conformers of the guanine/cytosine base pair. The calculations reveal that electron-driven interbase proton-transfer processes play an important role in the photochemistry of these systems. The exceptionally short lifetime of the UV-absorbing states of the Watson–Crick conformer is tentatively explained by the existence of a barrierless reaction path that connects the spectroscopic ¹ π π * excited state with the electronic ground state via two electronic curve crossings. For the non-Watson–Crick structures, the photochemically reactive state is located at higher energies, resulting in a barrier for proton transfer and, thus, a longer lifetime of the UV-absorbing ¹ π π * state. The computational results support the conjecture that the photochemistry of hydrogen bonds plays a decisive role for the photostability of the molecular encoding of the genetic information in isolated DNA base pairs.

The low-lying excited singlet states of the Watson–Crick form of the guanine–cytosine base pair have been investigated with multi-reference ab initio methods (complete-active-space self-consistent-field (CASSCF) method and second-order perturbation theory based on the CASSCF reference (CASPT2)). The reaction paths and energy profiles for single proton transfer from guanine to cytosine in the ¹ππ* guanine-to-cytosine charge-transfer state and for twisting of the CC double bond of the cytosine ring in the locally excited ¹ππ* state of cytosine have been explored by excited-state geometry optimization using the configuration-interaction-with-singles (CIS) method and single-point energy calculations at the CASPT2 level. Avoided crossings of the ¹ππ* potential-energy functions with the electronic ground-state potential-energy function have been identified along both reaction paths. The results suggest the existence of low-lying conical intersections of the ¹ππ* potential-energy surface with the S₀ surface which become accessible by possibly barrierless single proton transfer as well as out-of-plane deformation of cytosine and may trigger an ultrafast radiationless decay to the ground state. The relevance of these results for the rationalization of the photostability of the genetic code is briefly discussed.