Samar Saeed Khan

Dr. Samar Saeed Khan

Assistant Professor College of Dentistry Jazan University
orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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27 February 2022 in Polymers
Verified
Journal Article
Open access
PDF file
NYNeena Yadav
Neena Yadav
AFArul Prakash Francis
Arul Prakash Francis
VVVishnu Priya Veeraraghavan
Vishnu Priya Veeraraghavan
Shankargouda PatilShankargouda Patil
Shankargouda Patil
Shazia MushtaqShazia Mushtaq
Shazia Mushtaq
RRRukkumani Rajagopalan
Rukkumani Rajagopalan
Cancer is one of the most widespread deadly diseases, following cardiovascular disease, worldwide. Chemotherapy is widely used in combination with surgery, hormone and radiation therapy to treat various cancers. However, chemotherapeutic drugs can cause severe side effects due to non-specific targeting, poor bioavailability, low therapeutic indices, and high dose requirements. Several drug carriers successfully overcome these issues and deliver drugs to the desired sites, reducing the side effects. Among various drug delivery systems, polysaccharide-based carriers that target only the cancer cells have been developed to overcome the toxicity of chemotherapeutics. Polysaccharides are non-toxic, biodegradable, hydrophilic biopolymers that can be easily modified chemically to improve the bioavailability and stability for delivering therapeutics into cancer tissues. Different polysaccharides, such as chitosan, alginates, cyclodextrin, pullulan, hyaluronic acid, dextran, guar gum, pectin, and cellulose, have been used in anti-cancer drug delivery systems. This review highlights the recent progress made in polysaccharides-based drug carriers in anti-cancer therapy.

25 April 2022 in Molecules
Verified
Journal Article
Open access
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PKPradeep Kumar
Pradeep Kumar
TSThilagar Sivasankari
Thilagar Sivasankari
SRSanthiya Rengaraj
Santhiya Rengaraj
MMMaryam Mugri
Maryam Mugri
Mohammed SayedMohammed Sayed
Mohammed Sayed
Artak HeboyanArtak Heboyan
Artak Heboyan
Objective: Despite extensive research on periodontitis and rheumatoid arthritis, the underlying molecular connectivity between these condition remains largely unknown. This research aimed to integrate periodontitis and rheumatoid arthritis gene expression profiles to identify interconnecting genes and focus to develop a common lead molecule against these inflammatory conditions. Materials and Methods: Differentially expressed genes (DEGs) of periodontitis and rheumatoid arthritis were identified from the datasets retrieved from the Gene Expression Omnibus database. The network was constructed by merging DEGs, and the interconnecting genes were identified and ranked using GeneMANIA. For the selected top ranked gene, the potential inhibitor was searched using FINDSITEcomb2.0. Subsequently, the molecular docking and molecular dynamics were performed to determine the binding efficiency and protein-ligand complex stability, respectively. Results: From the network analysis, IFN-induced protein 44-like (IFI44L) was identified as a top ranked gene involved in most of the immunological pathway. With further virtual screening of 6507 molecules, vemurafenib was identified to be the best fit against the IFI44L target. The binding energy and stability of IFI44L with vemurafenib were investigated using molecular docking and molecular dynamics simulation. Docking results show binding energy of −7.7 Kcal/mol, and the simulation results show stability till 100 ns. Conclusions: The identified IFI44L may represent a common drug target for periodontitis and rheumatoid arthritis. Vemurafenib could be a potent anti-inflammatory drug for both diseases.

6 February 2022 in Diagnostics
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Journal Article
Open access
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AGArchana A. Gupta
Archana A. Gupta
SKSupriya Kheur
Supriya Kheur
Abdulrahman AlshehriAbdulrahman Alshehri
Abdulrahman Alshehri
WAWael Awadh
Wael Awadh
LALzeeshan Heera Ahmed
Lzeeshan Heera Ahmed
Shankargouda PatilShankargouda Patil
Shankargouda Patil
Background: To qualitatively and quantitatively review the reliability of palatal rugae as a tool for personal identification following orthodontic treatment. Methods: Cross-sectional retrospective studies assessing the accuracy of matching palatal rugae pattern pre- and post-orthodontic treatment were identified from PubMed and SCOPUS databases. The title and abstract of the articles identified in the search were screened for potential duplicates and relevancy to the topic of interest. The full text of the articles selected in the screening was analyzed using the inclusion and exclusion criteria. Quantitative analysis of the studies representing coherent data in terms of age and treatment choice was performed using RevMan software. Results: Out of 64 screened articles, only 18 articles fulfilled the eligibility criteria and were included in the systematic review. Out of these 18 articles, only 3 studies had data compatible with the quantitative analysis. Significant changes were noted in lateral first rugae in transverse bilateral direction (p = 0.02) and between second and third lateral rugae of the left side in the anteroposterior direction (p = 0.04). Despite the dimensional changes, observers in most studies were able to accurately (>90%) match the palatal rugae pre- and post-orthodontic treatment through visual observation. Conclusion: The accuracy of the visual matching, despite the significant dimensional changes, indicates that morphology could have potentially been the major matching factor. Thus, a combination of dimensional and morphological evaluation of the palatal rugae could potentially increase the accuracy of personal identification.

28 February 2022 in Journal of Personalized Medicine
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Journal Article
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PKPradeep Kumar
Pradeep Kumar
KVKalaivani Kalaivani Varatharajan
Kalaivani Kalaivani Varatharajan
HFHammam Fageeh
Hammam Fageeh
WIWael Ibraheem
Wael Ibraheem
MAManea Alahmari
Manea Alahmari
Shankargouda PatilShankargouda Patil
Shankargouda Patil
Periodontal disease is an infection-driven inflammatory disease characterized by the destruction of tooth-supporting tissues. The establishment of chronic inflammation will result in progressive destruction of bone and soft tissue changes. Severe periodontitis can lead to tooth loss. The disease has complex pathogenesis with an interplay between genetic, environmental, and host factors and pathogens. Effective management consists of plaque control and non-surgical interventions, along with adjuvant strategies to control inflammation and disrupt the pathogenic subgingival biofilms. Recent studies have examined novel approaches for managing periodontal diseases such as modulating microbial signaling mechanisms, tissue engineering, and molecular targeting of host inflammatory substances. Mounting evidence suggests the need to integrate omics-based approaches with traditional therapy to address the disease. This article discusses the various evolving and future drug targets, including proteomics, gene therapeutics, vaccines, and nanotechnology in personalized periodontal medicine for the effective management of periodontal diseases.

12 May 2022 in Diagnostics
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Journal Article
Open access
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SKSamar Saeed Khan
Samar Saeed Khan
MTManisha Tijare
Manisha Tijare
SKSowmya Kasetty
Sowmya Kasetty
MJMegha Jain
Megha Jain
AAAhmed Alamoudi
Ahmed Alamoudi
Shankargouda PatilShankargouda Patil
Shankargouda Patil
Recovery and amplification of nucleic acids from archived formalin-fixed tissue samples is the most developing field in retrospective genetic studies. We compared different deparaffinization methods and DNA isolation techniques, and intergroup comparisons were performed to evaluate the effectiveness of different storing methods for archival OSCC samples based on obtained mean DNA quantity, quality, and PCR amplification of the P53 gene. The study comprised 75 archival histologically diagnosed OSCC samples which were divided into Group I: Formalin-fixed paraffin-embedded tissue blocks and Group II: Long-term formalin-fixed tissue. A comparison of different deparaffinization methods showed that xylene deparaffinization is an efficient method to obtain suitable DNA. Comparing different DNA isolation techniques illustrated that the conventional phenol–chloroform method gives better integrity to DNA in contrast with the kit method. Comparison between FFPET and long-term FFT samples demonstrated that samples fixed in formalin overnight and embedded in wax yield better quality and quantity DNA in comparison with long-term samples fixed in formalin. To obtain suitable integrity of DNA, tissue samples should be stored by fixing in formalin overnight followed by preparation of paraffin tissue blocks, deparaffinization by xylene, and subjecting them to the conventional phenol–chloroform DNA isolation protocol.

23 December 2024 in BMC Oral Health
Verified
Journal Article
Open access
SPSameena Parveen
Sameena Parveen
SASyeda Arshiya Ara
Syeda Arshiya Ara
RPReghunathan Preethanath
Reghunathan Preethanath
SKSamar Saeed Khan
Samar Saeed Khan
HOHind Ali Osman
Hind Ali Osman
NENahid Mahmoud Hassan Elamin
Nahid Mahmoud Hassan Elamin
Background The association between diet and oral health is complex, yet understanding the influence of nutrition on oral health among dental professionals is limited. This study aimed to assess the knowledge levels of dental professionals in Saudi Arabia regarding the relationship between diet and oral health. Methods A cross-sectional survey was conducted among 211 dental professionals in Saudi Arabia using an 18-item questionnaire. Data analysis was performed using SPSS v23.0. Descriptive statistics were used to calculate the mean, standard deviation (SD), and proportions. The Kolmogorov-Smirnov test assessed data normality, while the Chi-squared test and post-hoc Tukey analysis were applied to evaluate associations between variables. Results The findings revealed that female practitioners (mean = 13.41, SD = 2.85) and older professionals had higher knowledge levels, with a total mean score of 12.33 (SD = 2.93). Significant correlations were observed between knowledge scores and age (ANOVA: F = 2.874; p = 0.024) and between knowledge scores and gender (t-test: t = 6.68, p < 0.001). Oral Medicine Specialists and Periodontists had the highest knowledge scores, with mean scores of 13.43 (SD = 2.87) and 13.63 (SD = 2.66), respectively, while General Dentists scored lower (mean = 10.49, SD = 3.12; ANOVA: F = 4.462; p < 0.001). Practitioners with less than five years of experience had significantly lower knowledge scores (mean = 11.14, SD = 3.23) compared to those with 5-10 years (mean = 13.40, SD = 2.34) and over 20 years of experience (mean = 12.69, SD = 2.22) (ANOVA: F = 5.016; p = 0.002). Conclusion Our findings reveal that dental professionals in Saudi Arabia have varying knowledge regarding the relationship between diet and oral health. While awareness exists, there are gaps in understanding the nutritional factors influencing oral health outcomes. Addressing these knowledge gaps through targeted educational interventions is essential, given the crucial role dental professionals play in promoting oral health and educating patients on the importance of nutrition. Enhancing this knowledge will improve patient care and contribute to better community health outcomes through informed preventive strategies and public health initiatives.