Henrik Karstoft

Dr. Henrik Karstoft


Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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30 July 2014 in Sensors
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Journal Article
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PCPeter Christiansen
Peter Christiansen
KSKim Arild Steen
Kim Arild Steen
Rasmus Nyholm JørgensenRasmus Nyholm Jørgensen
Rasmus Nyholm Jørgensen
HKHenrik Karstoft
Henrik Karstoft
In agricultural mowing operations, thousands of animals are injured or killed each year, due to the increased working widths and speeds of agricultural machinery. Detection and recognition of wildlife within the agricultural fields is important to reduce wildlife mortality and, thereby, promote wildlife-friendly farming. The work presented in this paper contributes to the automated detection and classification of animals in thermal imaging. The methods and results are based on top-view images taken manually from a lift to motivate work towards unmanned aerial vehicle-based detection and recognition. Hot objects are detected based on a threshold dynamically adjusted to each frame. For the classification of animals, we propose a novel thermal feature extraction algorithm. For each detected object, a thermal signature is calculated using morphological operations. The thermal signature describes heat characteristics of objects and is partly invariant to translation, rotation, scale and posture. The discrete cosine transform (DCT) is used to parameterize the thermal signature and, thereby, calculate a feature vector, which is used for subsequent classification. Using a k-nearest-neighbor (kNN) classifier, animals are discriminated from non-animals with a balanced classification accuracy of 84.7% in an altitude range of 3–10 m and an accuracy of 75.2% for an altitude range of 10–20 m. To incorporate temporal information in the classification, a tracking algorithm is proposed. Using temporal information improves the balanced classification accuracy to 93.3% in an altitude range 3–10 of meters and 77.7% in an altitude range of 10–20 m

11 November 2016 in Sensors
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Journal Article
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PCPeter Christiansen
Peter Christiansen
LNLars N. Nielsen
Lars N. Nielsen
KSKim Steen
Kim Steen
Rasmus Nyholm JørgensenRasmus Nyholm Jørgensen
Rasmus Nyholm Jørgensen
HKHenrik Karstoft
Henrik Karstoft
Convolutional neural network (CNN)-based systems are increasingly used in autonomous vehicles for detecting obstacles. CNN-based object detection and per-pixel classification (semantic segmentation) algorithms are trained for detecting and classifying a predefined set of object types. These algorithms have difficulties in detecting distant and heavily occluded objects and are, by definition, not capable of detecting unknown object types or unusual scenarios. The visual characteristics of an agriculture field is homogeneous, and obstacles, like people, animals and other obstacles, occur rarely and are of distinct appearance compared to the field. This paper introduces DeepAnomaly, an algorithm combining deep learning and anomaly detection to exploit the homogenous characteristics of a field to perform anomaly detection. We demonstrate DeepAnomaly as a fast state-of-the-art detector for obstacles that are distant, heavily occluded and unknown. DeepAnomaly is compared to state-of-the-art obstacle detectors including “Faster R-CNN: Towards Real-Time Object Detection with Region Proposal Networks” (RCNN). In a human detector test case, we demonstrate that DeepAnomaly detects humans at longer ranges (45–90 m) than RCNN. RCNN has a similar performance at a short range (0–30 m). However, DeepAnomaly has much fewer model parameters and (182 ms/25 ms =) a 7.28-times faster processing time per image. Unlike most CNN-based methods, the high accuracy, the low computation time and the low memory footprint make it suitable for a real-time system running on a embedded GPU (Graphics Processing Unit).

9 November 2017 in Sensors
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Journal Article
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MKMikkel Kragh
Mikkel Kragh
PCPeter Christiansen
Peter Christiansen
MLMorten Laursen
Morten Laursen
MLMorten Larsen
Morten Larsen
KSKim Steen
Kim Steen
Rasmus Nyholm JørgensenRasmus Nyholm Jørgensen
Rasmus Nyholm Jørgensen
In this paper, we present a multi-modal dataset for obstacle detection in agriculture. The dataset comprises approximately 2 h of raw sensor data from a tractor-mounted sensor system in a grass mowing scenario in Denmark, October 2016. Sensing modalities include stereo camera, thermal camera, web camera, 360 ∘ camera, LiDAR and radar, while precise localization is available from fused IMU and GNSS. Both static and moving obstacles are present, including humans, mannequin dolls, rocks, barrels, buildings, vehicles and vegetation. All obstacles have ground truth object labels and geographic coordinates.

15 February 2016 in Journal of Imaging
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Journal Article
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KSKim Arild Steen
Kim Arild Steen
PCPeter Christiansen
Peter Christiansen
HKHenrik Karstoft
Henrik Karstoft
Rasmus Nyholm JørgensenRasmus Nyholm Jørgensen
Rasmus Nyholm Jørgensen
In this paper, an algorithm for obstacle detection in agricultural fields is presented. The algorithm is based on an existing deep convolutional neural net, which is fine-tuned for detection of a specific obstacle. In ISO/DIS 18497, which is an emerging standard for safety of highly automated machinery in agriculture, a barrel-shaped obstacle is defined as the obstacle which should be robustly detected to comply with the standard. We show that our fine-tuned deep convolutional net is capable of detecting this obstacle with a precision of 99 . 9 % in row crops and 90 . 8 % in grass mowing, while simultaneously not detecting people and other very distinct obstacles in the image frame. As such, this short note argues that the obstacle defined in the emerging standard is not capable of ensuring safe operations when imaging sensors are part of the safety system.

17 December 2017 in Sensors
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Journal Article
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SSSøren Kelstrup Skovsen
Søren Kelstrup Skovsen
MDMads Dyrmann
Mads Dyrmann
AMAnders Mortensen
Anders Mortensen
KSKim Steen
Kim Steen
OGOle Green
Ole Green
HKHenrik Karstoft
Henrik Karstoft
Optimal fertilization of clover-grass fields relies on knowledge of the clover and grass fractions. This study shows how knowledge can be obtained by analyzing images collected in fields automatically. A fully convolutional neural network was trained to create a pixel-wise classification of clover, grass, and weeds in red, green, and blue (RGB) images of clover-grass mixtures. The estimated clover fractions of the dry matter from the images were found to be highly correlated with the real clover fractions of the dry matter, making this a cheap and non-destructive way of monitoring clover-grass fields. The network was trained solely on simulated top-down images of clover-grass fields. This enables the network to distinguish clover, grass, and weed pixels in real images. The use of simulated images for training reduces the manual labor to a few hours, as compared to more than 3000 h when all the real images are annotated for training. The network was tested on images with varied clover/grass ratios and achieved an overall pixel classification accuracy of 83.4%, while estimating the dry matter clover fraction with a standard deviation of 7.8%.

27 August 2012 in Sensors
Verified
Journal Article
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SKSimon Lind Kappel
Simon Lind Kappel
MRMichael Skovdal Rathleff
Michael Skovdal Rathleff
DHDan Hermann
Dan Hermann
OSOle Simonsen
Ole Simonsen
HKHenrik Karstoft
Henrik Karstoft
PAPeter Ahrendt
Peter Ahrendt
Analysis of foot movement is essential in the treatment and prevention of foot-related disorders. Measuring the in-shoe foot movement during everyday activities, such as sports, has the potential to become an important diagnostic tool in clinical practice. The current paper describes the development of a thin, flexible and robust capacitive strain sensor for the in-shoe measurement of the navicular drop. The navicular drop is a well-recognized measure of foot movement. The position of the strain sensor on the foot was analyzed to determine the optimal points of attachment. The sensor was evaluated against a state-of-the-art video-based system that tracks reflective markers on the bare foot. Preliminary experimental results show that the developed strain sensor is able to measure navicular drop on the bare foot with an accuracy on par with the video-based system and with a high reproducibility. Temporal comparison of video-based, barefoot and in-shoe measurements indicate that the developed sensor measures the navicular drop accurately in shoes and can be used without any discomfort for the user.