Pranita P Patil

Ms. Pranita P Patil

Harrisburg University of Science and Technology, Harrisburg, Illinois, USA
orcid

Research Focus & Metrics

Academic Career Length

12Years (2015-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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19 May 2024 in Biosensors
Verified
Journal Article
Open access
PDF file
PPPranita P Patil
Pranita P Patil
WFW. Randolph Ford
W. Randolph Ford
Parkinson’s disease (PD) is a neurodegenerative and progressive disease that impacts the nerve cells in the brain and varies from person to person. The exact cause of PD is still unknown, and the diagnosis of PD does not include a specific objective test with certainty. Although deep learning has made great progress in medical neuroimaging analysis, these methods are very susceptible to biases present in neuroimaging datasets. An innovative decorrelated deep learning technique is introduced to mitigate class bias and scanner bias while simultaneously focusing on finding distinguishing characteristics in resting-state functional MRI (rs-fMRI) data, which assists in recognizing PD with good accuracy. The decorrelation function reduces the nonlinear correlation between features and bias in order to learn bias-invariant features. The publicly available Parkinson’s Progression Markers Initiative (PPMI) dataset, referred to as a single-scanner imbalanced dataset in this study, was used to validate our method. The imbalanced dataset problem affects the performance of the deep learning framework by overfitting to the majority class. To resolve this problem, we propose a new decorrelated convolutional neural network (DcCNN) framework by applying decorrelation-based optimization to convolutional neural networks (CNNs). An analysis of evaluation metrics comparisons shows that integrating the decorrelation function boosts the performance of PD recognition by removing class bias. Specifically, our DcCNN models perform significantly better than existing traditional approaches to tackle the imbalance problem. Finally, the same framework can be extended to create scanner-invariant features without significantly impacting the performance of a model. The obtained dataset is a multiscanner dataset, which leads to scanner bias due to the differences in acquisition protocols and scanners. The multiscanner dataset is a combination of two publicly available datasets, namely, PPMI and FTLDNI—the frontotemporal lobar degeneration neuroimaging initiative (NIFD) dataset. The results of t-distributed stochastic neighbor embedding (t-SNE) and scanner classification accuracy of our proposed feature extraction–DcCNN (FE-DcCNN) model validated the effective removal of scanner bias. Our method achieves an average accuracy of 77.80% on a multiscanner dataset for differentiating PD from a healthy control, which is superior to the DcCNN model trained on a single-scanner imbalanced dataset.

29 March 2022 in Future Internet
Verified
Journal Article
Open access
PDF file
PPPranita P Patil
Pranita P Patil
KPKevin Purcell
Kevin Purcell
Although deep learning has proven to be tremendously successful, the main issue is the dependency of its performance on the quality and quantity of training datasets. Since the quality of data can be affected by biases, a novel deep learning method based on decorrelation is presented in this study. The decorrelation specifically learns bias invariant features by reducing the non-linear statistical dependency between features and bias itself. This makes the deep learning models less prone to biased decisions by addressing data bias issues. We introduce Decorrelated Deep Neural Networks (DcDNN) or Decorrelated Convolutional Neural Networks (DcCNN) and Decorrelated Artificial Neural Networks (DcANN) by applying decorrelation-based optimization to Deep Neural Networks (DNN) and Artificial Neural Networks (ANN), respectively. Previous bias mitigation methods result in a drastic loss in accuracy at the cost of bias reduction. Our study aims to resolve this by controlling how strongly the decorrelation function for bias reduction and loss function for accuracy affect the network objective function. The detailed analysis of the hyperparameter shows that for the optimal value of hyperparameter, our model is capable of maintaining accuracy while being bias invariant. The proposed method is evaluated on several benchmark datasets with different types of biases such as age, gender, and color. Additionally, we test our approach along with traditional approaches to analyze the bias mitigation in deep learning. Using simulated datasets, the results of t-distributed stochastic neighbor embedding (t-SNE) of the proposed model validated the effective removal of bias. An analysis of fairness metrics and accuracy comparisons shows that using our proposed models reduces the biases without compromising accuracy significantly. Furthermore, the comparison of our method with existing methods shows the superior performance of our model in terms of bias mitigation, as well as simplicity of training.

15 May 2020
Verified
Conference Paper
Open access
MVMaria Vaida
Maria Vaida
PPPranita P Patil
Pranita P Patil
Probabilistic Graph Neural Network (PGNN) introduced here proposes a machine learning application that combines deep learning on graphs with probabilistic modeling, to account for uncertainty in both inputs and outputs. Graph neural network models (GNNs) have been extensively used in modeling graph-structured data. However this class of models learn point estimates conditioned on arbitrary weights initializations, which can lead to poor convergence and sub-optimal generalization. By enhancing deep learning with Bayesian modeling, PGNN aims to strengthen the prediction accuracy, and provide more stable predictions. In order to achieve this goal, PGNN learns a distribution over network weights and encodings, thus solving the epistemic and aleatoric uncertainty inherited in network parameters and model predictions. Through Markov Chain Monte Carlo Random Walk Metropolis sampling of weights and likelihood distributions, PGNN essentially generates an ensemble of models in one iteration, computing an estimate of credible intervals over the predictions. PGNN is applied to the task of semi-supervised node classification and tested on 3 benchmark datasets, yielding improved accuracy, and more stable predictions when compared with standard GNNs and other Bayesian graph models.

1 September 2015
Verified
Conference Paper
Closed access
MAMushfiqul Alam
Mushfiqul Alam
PPPranita P Patil
Pranita P Patil
MHMartin T. Hagan
Martin T. Hagan
DCDamon M. Chandler
Damon M. Chandler
A crucial requirement for modern image coding is the ability to accurately and efficiently predict the local visibility of coding artifacts. Such predictions could help guide the allocation of bits or the determination of quality for each spatial region. This paper presents a convolutional-neural-network-based (CNN-based) model to predict local distortion visibility in natural scenes. Although CNNs have recently emerged as a powerful tool for many computer vision applications due to its deep learning abilities and computational efficiency, CNNs have never been tested for predicting continuous values such as visibility thresholds. We optimized the model's parameters on our recently published large dataset on local masking in natural scenes [Alam et al., Journal of Vision, 2014]. Testing results demonstrate that our CNN-based model: (1) can indeed succeed in this task; (2) can more accurately predict thresholds than modern gain-control-based models; (3) is competitive in terms of prediction accuracy with a gain-control model tuned to the same dataset; and (4) is significantly more computationally efficient than modern gain-controls models.

22 March 2024 in Preprints.org
Verified
Preprint
Open access
PDF file
PPPranita P Patil
Pranita P Patil
WFW. Randolph Ford
W. Randolph Ford
Parkinson’s Disease (PD) is a neurodegenerative and progressive disease that impacts the nerve cells in the brain and varies from person to person. The exact cause of PD is still unknown, and the diagnosis of PD does not include a specific objective test with certainty. Although deep learning has made great progress in medical neuroimaging analysis, these methods are very susceptible to biases present in neuroimaging datasets. An innovative decorrelated deep learning technique is introduced to mitigate class bias and scanner bias while simultaneously focusing on finding distinguishing characteristics in resting-state functional MRI (rs-fMRI) data, which assist in recognizing the PD with good accuracy. The decorrelation function reduces the non-linear correlation between features and bias in order to learn bias-invariant features. The Parkinson’s Progression Markers Initiative (PPMI) dataset, referred to as a single scanner imbalanced dataset in this study used to validate our method. The imbalanced dataset problem affects the performance of the deep learning framework by overfitting to the majority class. To resolve this problem, we propose a new Decorrelated Convolutional Neural Networks (DcCNN) framework by applying decorrelation-based optimization to Convolutional Neural Networks(CNN). An analysis of evaluation metrics comparisons shows that integrating the decorrelation function boosts the performance of PD recognition by removing class bias. Specifically, our DcCNN model performs significantly better than existing traditional approaches to tackle the imbalance problem. Finally, the same framework can be extended to create scanner invariant features without significantly impacting the performance of a model. The obtained dataset is a multi-scanner dataset which leads to scanner bias due to the differences in acquisition protocols and scanners. The multi-scanner dataset is a combination of two datasets, namely PPMI and FTLDNI - frontotemporal lobar degeneration neuroimaging initiative (NIFD) dataset. The results of t-distributed stochastic neighbor embedding (t-SNE) and scanner classification accuracy of our proposed Feature Extraction-DcCNN (FE-DcCNN) model validated the effective removal of scanner bias. Our method achieves an average accuracy of 77.80% on a multi-scanner dataset for differentiating PD from healthy control, which is superior to the DcCNN model trained on a single scanner imbalanced dataset.

17 March 2015
Verified
Conference Paper
Closed access
PDF file
MAMushfiqul Alam
Mushfiqul Alam
PPPranita P Patil
Pranita P Patil
MHMartin T. Hagan
Martin T. Hagan
DCDamon M. Chandler
Damon M. Chandler